Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YPL014WYPL014W 1146 nt2.45□□□□□ -2.02
VPS13Q07878 SWD3YBR175W 948 nt2.45□□□□□ -2.02
VPS13Q07878 KIP1YBL063W 3336 nt2.45□□□□□ -2.02
VPS13Q07878 NAB3YPL190C 2409 nt2.45□□□□□ -2.02
VPS13Q07878 VAC17YCL063W 1272 nt2.45□□□□□ -2.02
VPS13Q07878 RTT103YDR289C 1230 nt2.45□□□□□ -2.02
VPS13Q07878 YHL045WYHL045W 348 nt2.45□□□□□ -2.02
VPS13Q07878 TCO89YPL180W 2400 nt2.45□□□□□ -2.02
VPS13Q07878 YBR116CYBR116C 528 nt2.44□□□□□ -2.02
VPS13Q07878 ESL1YIL151C 3357 nt2.44□□□□□ -2.02
VPS13Q07878 TGL1YKL140W 1647 nt2.44□□□□□ -2.02
VPS13Q07878 PHS1YJL097W 654 nt2.44□□□□□ -2.02
VPS13Q07878 MHO1YJR008W 1017 nt2.44□□□□□ -2.02
VPS13Q07878 CHS5YLR330W 2016 nt2.44□□□□□ -2.02
VPS13Q07878 PNO1YOR145C 825 nt2.44□□□□□ -2.02
VPS13Q07878 ATG13YPR185W 2217 nt2.43□□□□□ -2.02
VPS13Q07878 DET1YDR051C 1005 nt2.43□□□□□ -2.02
VPS13Q07878 snR32snR32 188 nt2.43□□□□□ -2.02
VPS13Q07878 ERG11YHR007C 1593 nt2.42□□□□□ -2.02
VPS13Q07878 ROT1YMR200W 771 nt2.42□□□□□ -2.02
VPS13Q07878 DNF1YER166W 4716 nt2.42□□□□□ -2.02
VPS13Q07878 YPL216WYPL216W 3309 nt2.42□□□□□ -2.02
VPS13Q07878 PDR11YIL013C 4236 nt2.42□□□□□ -2.02
VPS13Q07878 VPS36YLR417W 1701 nt2.42□□□□□ -2.02
VPS13Q07878 TSC11YER093C 4293 nt2.42□□□□□ -2.02
VPS13Q07878 YHP1YDR451C 1062 nt2.42□□□□□ -2.02
VPS13Q07878 RRT13YER066W 558 nt2.42□□□□□ -2.02
VPS13Q07878 SDT1YGL224C 843 nt2.42□□□□□ -2.02
VPS13Q07878 GPI18YBR004C 1302 nt2.42□□□□□ -2.02
VPS13Q07878 MRD1YPR112C 2664 nt2.42□□□□□ -2.02
VPS13Q07878 ARP7YPR034W 1434 nt2.42□□□□□ -2.02
VPS13Q07878 TRE2YOR256C 2430 nt2.42□□□□□ -2.02
VPS13Q07878 MST27YGL051W 705 nt2.42□□□□□ -2.02
VPS13Q07878 PFY1YOR122C 381 nt2.42□□□□□ -2.02
VPS13Q07878 MDN1YLR106C 14733 nt2.42□□□□□ -2.02
VPS13Q07878 BMS1YPL217C 3552 nt2.41□□□□□ -2.02
VPS13Q07878 GRS2YPR081C 1857 nt2.41□□□□□ -2.02
VPS13Q07878 SGS1YMR190C 4344 nt2.41□□□□□ -2.02
VPS13Q07878 SEN54YPL083C 1404 nt2.41□□□□□ -2.02
VPS13Q07878 RIM15YFL033C 5313 nt2.41□□□□□ -2.02
VPS13Q07878 IZH3YLR023C 1632 nt2.41□□□□□ -2.02
VPS13Q07878 GSC2YGR032W 5688 nt2.4□□□□□ -2.02
VPS13Q07878 YLR374CYLR374C 390 nt2.4□□□□□ -2.02
VPS13Q07878 SVS1YPL163C 783 nt2.4□□□□□ -2.02
VPS13Q07878 SUB2YDL084W 1341 nt2.4□□□□□ -2.02
VPS13Q07878 YDR131CYDR131C 1671 nt2.4□□□□□ -2.03
VPS13Q07878 SLM2YNL047C 1971 nt2.4□□□□□ -2.03
VPS13Q07878 LIF1YGL090W 1266 nt2.4□□□□□ -2.03
VPS13Q07878 YHL037CYHL037C 402 nt2.4□□□□□ -2.03
VPS13Q07878 CIT3YPR001W 1461 nt2.4□□□□□ -2.03
VPS13Q07878 NAM2YLR382C 2685 nt2.4□□□□□ -2.03
VPS13Q07878 ALK2YBL009W 2031 nt2.4□□□□□ -2.03
VPS13Q07878 PEX1YKL197C 3132 nt2.4□□□□□ -2.03
VPS13Q07878 PHO91YNR013C 2685 nt2.39□□□□□ -2.03
VPS13Q07878 POL12YBL035C 2118 nt2.39□□□□□ -2.03
VPS13Q07878 SIR4YDR227W 4077 nt2.39□□□□□ -2.03
VPS13Q07878 CLN2YPL256C 1638 nt2.39□□□□□ -2.03
VPS13Q07878 RRN11YML043C 1524 nt2.39□□□□□ -2.03
VPS13Q07878 YDL041WYDL041W 354 nt2.38□□□□□ -2.03
VPS13Q07878 GRX4YER174C 735 nt2.38□□□□□ -2.03
VPS13Q07878 OAF3YKR064W 2592 nt2.38□□□□□ -2.03
VPS13Q07878 PDR1YGL013C 3207 nt2.37□□□□□ -2.03
VPS13Q07878 TRM44YPL030W 1704 nt2.37□□□□□ -2.03
VPS13Q07878 PUT3YKL015W 2940 nt2.37□□□□□ -2.03
VPS13Q07878 TAF6YGL112C 1551 nt2.37□□□□□ -2.03
VPS13Q07878 IRC20YLR247C 4671 nt2.37□□□□□ -2.03
VPS13Q07878 NAM9YNL137C 1461 nt2.37□□□□□ -2.03
VPS13Q07878 ULP1YPL020C 1866 nt2.37□□□□□ -2.03
VPS13Q07878 ARO1YDR127W 4767 nt2.37□□□□□ -2.03
VPS13Q07878 MEF2YJL102W 2460 nt2.37□□□□□ -2.03
VPS13Q07878 ROY1YMR258C 1662 nt2.37□□□□□ -2.03
VPS13Q07878 YNL193WYNL193W 1677 nt2.37□□□□□ -2.03
VPS13Q07878 YBR090CYBR090C 369 nt2.37□□□□□ -2.03
VPS13Q07878 XRN1YGL173C 4587 nt2.37□□□□□ -2.03
VPS13Q07878 BCH2YKR027W 2298 nt2.36□□□□□ -2.03
VPS13Q07878 YMR085WYMR085W 1299 nt2.36□□□□□ -2.03
VPS13Q07878 POL30YBR088C 777 nt2.36□□□□□ -2.03
VPS13Q07878 KEL2YGR238C 2649 nt2.36□□□□□ -2.03
VPS13Q07878 GAS5YOL030W 1455 nt2.36□□□□□ -2.03
VPS13Q07878 YHR073W-AYHR073W-A 177 nt2.36□□□□□ -2.03
VPS13Q07878 RPC19YNL113W 429 nt2.36□□□□□ -2.03
VPS13Q07878 DRS2YAL026C 4068 nt2.36□□□□□ -2.03
VPS13Q07878 GAL80YML051W 1308 nt2.36□□□□□ -2.03
VPS13Q07878 YHR095WYHR095W 495 nt2.35□□□□□ -2.03
VPS13Q07878 RRM3YHR031C 2172 nt2.35□□□□□ -2.03
VPS13Q07878 GLT1YDL171C 6438 nt2.35□□□□□ -2.03
VPS13Q07878 IPT1YDR072C 1584 nt2.35□□□□□ -2.03
VPS13Q07878 TFC3YAL001C 3483 nt2.35□□□□□ -2.03
VPS13Q07878 PAU17YLL025W 375 nt2.35□□□□□ -2.03
VPS13Q07878 PAC1YOR269W 1485 nt2.35□□□□□ -2.03
VPS13Q07878 IBD2YNL164C 1056 nt2.35□□□□□ -2.03
VPS13Q07878 WHI4YDL224C 1950 nt2.34□□□□□ -2.03
VPS13Q07878 YDR209CYDR209C 414 nt2.34□□□□□ -2.03
VPS13Q07878 YBL029C-AYBL029C-A 285 nt2.34□□□□□ -2.03
VPS13Q07878 OAF1YAL051W 3144 nt2.34□□□□□ -2.03
VPS13Q07878 YGL159WYGL159W 1113 nt2.34□□□□□ -2.04
VPS13Q07878 YPT35YHR105W 645 nt2.34□□□□□ -2.04
VPS13Q07878 CAB2YIL083C 1098 nt2.34□□□□□ -2.04
VPS13Q07878 DAN4YJR151C 3486 nt2.34□□□□□ -2.04
VPS13Q07878 ATG21YPL100W 1491 nt2.33□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 56.6 ms