Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2NP61088 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2NP61088 AC137767.1-201ENST00000602918 1920 ntBASIC18.9■□□□□ 0.62
UBE2NP61088 BX005040.4-201ENST00000637145 1518 ntBASIC18.9■□□□□ 0.62
UBE2NP61088 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
UBE2NP61088 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBE2NP61088 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.89■□□□□ 0.61
UBE2NP61088 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.89■□□□□ 0.61
UBE2NP61088 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2NP61088 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2NP61088 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
UBE2NP61088 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.89■□□□□ 0.61
UBE2NP61088 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.89■□□□□ 0.61
UBE2NP61088 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
UBE2NP61088 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
UBE2NP61088 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2NP61088 AC133561.1-201ENST00000568600 2415 ntBASIC18.89■□□□□ 0.61
UBE2NP61088 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
UBE2NP61088 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
UBE2NP61088 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.88■□□□□ 0.61
UBE2NP61088 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.88■□□□□ 0.61
UBE2NP61088 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.88■□□□□ 0.61
UBE2NP61088 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.88■□□□□ 0.61
UBE2NP61088 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.88■□□□□ 0.61
UBE2NP61088 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2NP61088 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
UBE2NP61088 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
UBE2NP61088 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
UBE2NP61088 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.87■□□□□ 0.61
UBE2NP61088 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 AL034346.1-201ENST00000568244 1277 ntBASIC18.87■□□□□ 0.61
UBE2NP61088 LINC02228-203ENST00000641970 1355 ntBASIC18.87■□□□□ 0.61
UBE2NP61088 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
UBE2NP61088 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.87■□□□□ 0.61
UBE2NP61088 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2NP61088 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
UBE2NP61088 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE2NP61088 AC139530.1-201ENST00000575312 1977 ntBASIC18.86■□□□□ 0.61
UBE2NP61088 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2NP61088 LINC00526-201ENST00000581067 1875 ntBASIC18.86■□□□□ 0.61
UBE2NP61088 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2NP61088 AC127496.7-201ENST00000625110 1798 ntBASIC18.86■□□□□ 0.61
UBE2NP61088 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2NP61088 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2NP61088 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2NP61088 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
UBE2NP61088 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2NP61088 AC097381.1-201ENST00000429019 1296 ntBASIC18.86■□□□□ 0.61
UBE2NP61088 AC123595.1-201ENST00000440769 1046 ntBASIC18.86■□□□□ 0.61
UBE2NP61088 MIR6821-201ENST00000617625 74 ntBASIC18.86■□□□□ 0.61
UBE2NP61088 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.86■□□□□ 0.61
UBE2NP61088 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2NP61088 AC068473.5-201ENST00000616428 2072 ntBASIC18.86■□□□□ 0.61
UBE2NP61088 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2NP61088 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2NP61088 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
UBE2NP61088 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.86■□□□□ 0.61
UBE2NP61088 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2NP61088 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2NP61088 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2NP61088 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
UBE2NP61088 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2NP61088 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE2NP61088 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.85■□□□□ 0.61
UBE2NP61088 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2NP61088 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2NP61088 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2NP61088 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE2NP61088 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBE2NP61088 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
UBE2NP61088 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2NP61088 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.85■□□□□ 0.61
UBE2NP61088 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2NP61088 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2NP61088 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBE2NP61088 AP004607.7-201ENST00000527152 1677 ntBASIC18.85■□□□□ 0.61
UBE2NP61088 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
UBE2NP61088 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms