Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PEX3P56589 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
PEX3P56589 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PEX3P56589 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.77■■□□□ 1.4
PEX3P56589 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.77■■□□□ 1.4
PEX3P56589 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.77■■□□□ 1.4
PEX3P56589 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PEX3P56589 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.77■■□□□ 1.4
PEX3P56589 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.77■■□□□ 1.4
PEX3P56589 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.77■■□□□ 1.4
PEX3P56589 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PEX3P56589 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PEX3P56589 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PEX3P56589 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PEX3P56589 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PEX3P56589 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PEX3P56589 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.76■■□□□ 1.39
PEX3P56589 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PEX3P56589 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PEX3P56589 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PEX3P56589 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PEX3P56589 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PEX3P56589 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.76■■□□□ 1.39
PEX3P56589 LINC02228-203ENST00000641970 1355 ntBASIC23.76■■□□□ 1.39
PEX3P56589 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PEX3P56589 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.76■■□□□ 1.39
PEX3P56589 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.75■■□□□ 1.39
PEX3P56589 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PEX3P56589 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PEX3P56589 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PEX3P56589 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PEX3P56589 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PEX3P56589 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.75■■□□□ 1.39
PEX3P56589 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.75■■□□□ 1.39
PEX3P56589 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.75■■□□□ 1.39
PEX3P56589 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PEX3P56589 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.75■■□□□ 1.39
PEX3P56589 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PEX3P56589 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.75■■□□□ 1.39
PEX3P56589 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.75■■□□□ 1.39
PEX3P56589 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX3P56589 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX3P56589 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX3P56589 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX3P56589 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX3P56589 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.74■■□□□ 1.39
PEX3P56589 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PEX3P56589 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX3P56589 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.74■■□□□ 1.39
PEX3P56589 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PEX3P56589 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX3P56589 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.74■■□□□ 1.39
PEX3P56589 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.74■■□□□ 1.39
PEX3P56589 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX3P56589 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX3P56589 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX3P56589 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX3P56589 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX3P56589 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX3P56589 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX3P56589 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX3P56589 AC009237.3-201ENST00000393279 1427 ntBASIC23.73■■□□□ 1.39
PEX3P56589 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.73■■□□□ 1.39
PEX3P56589 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PEX3P56589 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PEX3P56589 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PEX3P56589 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.72■■□□□ 1.39
PEX3P56589 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PEX3P56589 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PEX3P56589 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.72■■□□□ 1.39
PEX3P56589 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PEX3P56589 AL034346.1-201ENST00000568244 1277 ntBASIC23.72■■□□□ 1.39
PEX3P56589 CCDC92B-201ENST00000575506 885 ntBASIC23.72■■□□□ 1.39
PEX3P56589 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.72■■□□□ 1.39
PEX3P56589 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.72■■□□□ 1.39
PEX3P56589 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.72■■□□□ 1.39
PEX3P56589 AC005224.4-201ENST00000583262 1652 ntBASIC23.72■■□□□ 1.39
PEX3P56589 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PEX3P56589 AC092053.2-201ENST00000640557 1818 ntBASIC23.72■■□□□ 1.39
PEX3P56589 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.72■■□□□ 1.39
PEX3P56589 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PEX3P56589 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PEX3P56589 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PEX3P56589 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PEX3P56589 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PEX3P56589 AL117328.2-201ENST00000624617 1940 ntBASIC23.71■■□□□ 1.39
PEX3P56589 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PEX3P56589 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
PEX3P56589 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PEX3P56589 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PEX3P56589 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.71■■□□□ 1.39
PEX3P56589 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PEX3P56589 TERF1P2-201ENST00000583350 1212 ntBASIC23.71■■□□□ 1.39
PEX3P56589 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.71■■□□□ 1.39
PEX3P56589 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PEX3P56589 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PEX3P56589 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.71■■□□□ 1.39
PEX3P56589 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PEX3P56589 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PEX3P56589 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms