Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 KRT18P61-201ENST00000585825 1298 ntBASIC19.38■□□□□ 0.69
GFRA1P56159 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
GFRA1P56159 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
GFRA1P56159 AC055733.4-201ENST00000638462 1354 ntBASIC19.38■□□□□ 0.69
GFRA1P56159 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA1P56159 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA1P56159 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
GFRA1P56159 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GFRA1P56159 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.37■□□□□ 0.69
GFRA1P56159 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.37■□□□□ 0.69
GFRA1P56159 AC079140.4-201ENST00000507448 529 ntBASIC19.37■□□□□ 0.69
GFRA1P56159 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.37■□□□□ 0.69
GFRA1P56159 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.37■□□□□ 0.69
GFRA1P56159 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GFRA1P56159 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA1P56159 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.36■□□□□ 0.69
GFRA1P56159 AP004607.4-201ENST00000530158 1459 ntBASIC19.36■□□□□ 0.69
GFRA1P56159 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.36■□□□□ 0.69
GFRA1P56159 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 AC022517.1-201ENST00000592429 346 ntBASIC19.36■□□□□ 0.69
GFRA1P56159 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA1P56159 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA1P56159 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA1P56159 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.35■□□□□ 0.69
GFRA1P56159 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA1P56159 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.35■□□□□ 0.69
GFRA1P56159 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA1P56159 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA1P56159 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA1P56159 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
GFRA1P56159 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
GFRA1P56159 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.35■□□□□ 0.69
GFRA1P56159 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.35■□□□□ 0.69
GFRA1P56159 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.35■□□□□ 0.69
GFRA1P56159 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.35■□□□□ 0.69
GFRA1P56159 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.35■□□□□ 0.69
GFRA1P56159 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA1P56159 AC080038.3-201ENST00000623346 1952 ntBASIC19.35■□□□□ 0.69
GFRA1P56159 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.35■□□□□ 0.69
GFRA1P56159 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA1P56159 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
GFRA1P56159 AC004854.2-201ENST00000608450 1441 ntBASIC19.34■□□□□ 0.69
GFRA1P56159 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.34■□□□□ 0.69
GFRA1P56159 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
GFRA1P56159 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA1P56159 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA1P56159 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA1P56159 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.34■□□□□ 0.69
GFRA1P56159 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA1P56159 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
GFRA1P56159 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.34■□□□□ 0.69
GFRA1P56159 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.34■□□□□ 0.69
GFRA1P56159 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.34■□□□□ 0.69
GFRA1P56159 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA1P56159 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
GFRA1P56159 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA1P56159 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
GFRA1P56159 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GFRA1P56159 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.69
GFRA1P56159 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GFRA1P56159 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.33■□□□□ 0.69
GFRA1P56159 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.33■□□□□ 0.68
GFRA1P56159 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA1P56159 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.33■□□□□ 0.68
GFRA1P56159 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.33■□□□□ 0.68
GFRA1P56159 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA1P56159 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.33■□□□□ 0.68
GFRA1P56159 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
GFRA1P56159 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.33■□□□□ 0.68
GFRA1P56159 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA1P56159 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA1P56159 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA1P56159 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA1P56159 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.32■□□□□ 0.68
GFRA1P56159 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA1P56159 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA1P56159 AP006587.3-201ENST00000525742 1516 ntBASIC19.32■□□□□ 0.68
GFRA1P56159 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GFRA1P56159 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.32■□□□□ 0.68
GFRA1P56159 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.32■□□□□ 0.68
GFRA1P56159 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA1P56159 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA1P56159 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA1P56159 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA1P56159 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA1P56159 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.32■□□□□ 0.68
GFRA1P56159 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA1P56159 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms