Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRRX1P54821 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRRX1P54821 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.68■□□□□ 0.42
PRRX1P54821 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.68■□□□□ 0.42
PRRX1P54821 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.68■□□□□ 0.42
PRRX1P54821 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.68■□□□□ 0.42
PRRX1P54821 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.68■□□□□ 0.42
PRRX1P54821 AL031432.3-201ENST00000607698 485 ntBASIC17.68■□□□□ 0.42
PRRX1P54821 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRRX1P54821 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRRX1P54821 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRRX1P54821 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PRRX1P54821 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRRX1P54821 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRRX1P54821 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PRRX1P54821 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRRX1P54821 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.67■□□□□ 0.42
PRRX1P54821 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRRX1P54821 ECEL1P1-201ENST00000373592 1742 ntBASIC17.67■□□□□ 0.42
PRRX1P54821 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PRRX1P54821 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRRX1P54821 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRRX1P54821 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.67■□□□□ 0.42
PRRX1P54821 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRRX1P54821 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.67■□□□□ 0.42
PRRX1P54821 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.67■□□□□ 0.42
PRRX1P54821 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.67■□□□□ 0.42
PRRX1P54821 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRRX1P54821 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRRX1P54821 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRRX1P54821 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRRX1P54821 TSPY26P-201ENST00000476365 1326 ntBASIC17.67■□□□□ 0.42
PRRX1P54821 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.66■□□□□ 0.42
PRRX1P54821 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.66■□□□□ 0.42
PRRX1P54821 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.66■□□□□ 0.42
PRRX1P54821 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.66■□□□□ 0.42
PRRX1P54821 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
PRRX1P54821 MIR638-201ENST00000385237 100 ntBASIC17.66■□□□□ 0.42
PRRX1P54821 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.66■□□□□ 0.42
PRRX1P54821 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRRX1P54821 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.65■□□□□ 0.42
PRRX1P54821 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.65■□□□□ 0.42
PRRX1P54821 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.65■□□□□ 0.42
PRRX1P54821 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.65■□□□□ 0.42
PRRX1P54821 AC080038.3-201ENST00000623346 1952 ntBASIC17.65■□□□□ 0.42
PRRX1P54821 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.65■□□□□ 0.42
PRRX1P54821 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.65■□□□□ 0.42
PRRX1P54821 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRRX1P54821 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PRRX1P54821 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PRRX1P54821 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRRX1P54821 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRRX1P54821 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRRX1P54821 AC092053.2-201ENST00000640557 1818 ntBASIC17.64■□□□□ 0.41
PRRX1P54821 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
PRRX1P54821 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.64■□□□□ 0.41
PRRX1P54821 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.64■□□□□ 0.41
PRRX1P54821 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.64■□□□□ 0.41
PRRX1P54821 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.64■□□□□ 0.41
PRRX1P54821 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRRX1P54821 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRRX1P54821 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRRX1P54821 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRRX1P54821 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRRX1P54821 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.64■□□□□ 0.41
PRRX1P54821 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRRX1P54821 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRRX1P54821 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.63■□□□□ 0.41
PRRX1P54821 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PRRX1P54821 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRRX1P54821 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.63■□□□□ 0.41
PRRX1P54821 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.63■□□□□ 0.41
PRRX1P54821 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRRX1P54821 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.63■□□□□ 0.41
PRRX1P54821 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.63■□□□□ 0.41
PRRX1P54821 AL034346.1-201ENST00000568244 1277 ntBASIC17.63■□□□□ 0.41
PRRX1P54821 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms