Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MDK-213ENST00000617138 635 ntTSL 2 BASIC31.19■■■□□ 2.58
CLTCL1P53675 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC31.19■■■□□ 2.58
CLTCL1P53675 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CLTCL1P53675 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CLTCL1P53675 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC31.19■■■□□ 2.58
CLTCL1P53675 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC31.18■■■□□ 2.58
CLTCL1P53675 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CLTCL1P53675 GPX1P1-201ENST00000388829 606 ntBASIC31.18■■■□□ 2.58
CLTCL1P53675 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC31.18■■■□□ 2.58
CLTCL1P53675 APTR-205ENST00000447009 902 ntTSL 2 BASIC31.18■■■□□ 2.58
CLTCL1P53675 AL034346.1-201ENST00000568244 1277 ntBASIC31.18■■■□□ 2.58
CLTCL1P53675 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CLTCL1P53675 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CLTCL1P53675 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC31.18■■■□□ 2.58
CLTCL1P53675 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC31.18■■■□□ 2.58
CLTCL1P53675 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC31.18■■■□□ 2.58
CLTCL1P53675 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CLTCL1P53675 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
CLTCL1P53675 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
CLTCL1P53675 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLTCL1P53675 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC31.17■■■□□ 2.58
CLTCL1P53675 OR7E47P-201ENST00000546390 1422 ntBASIC31.17■■■□□ 2.58
CLTCL1P53675 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CLTCL1P53675 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLTCL1P53675 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CLTCL1P53675 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLTCL1P53675 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.16■■■□□ 2.58
CLTCL1P53675 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CLTCL1P53675 AC005181.1-201ENST00000604782 1256 ntBASIC31.16■■■□□ 2.58
CLTCL1P53675 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CLTCL1P53675 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CLTCL1P53675 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC31.16■■■□□ 2.58
CLTCL1P53675 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
CLTCL1P53675 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CLTCL1P53675 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CLTCL1P53675 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
CLTCL1P53675 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CLTCL1P53675 TSPY6P-201ENST00000448518 926 ntBASIC31.16■■■□□ 2.58
CLTCL1P53675 OAS3-207ENST00000551007 998 ntTSL 2 BASIC31.16■■■□□ 2.58
CLTCL1P53675 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.16■■■□□ 2.58
CLTCL1P53675 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC31.16■■■□□ 2.58
CLTCL1P53675 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.16■■■□□ 2.58
CLTCL1P53675 AL121832.2-201ENST00000610979 668 ntBASIC31.16■■■□□ 2.58
CLTCL1P53675 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CLTCL1P53675 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CLTCL1P53675 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.15■■■□□ 2.58
CLTCL1P53675 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.15■■■□□ 2.58
CLTCL1P53675 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC31.14■■■□□ 2.58
CLTCL1P53675 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CLTCL1P53675 APTR-203ENST00000430801 583 ntTSL 5 BASIC31.14■■■□□ 2.58
CLTCL1P53675 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC31.14■■■□□ 2.58
CLTCL1P53675 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CLTCL1P53675 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC31.14■■■□□ 2.58
CLTCL1P53675 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLTCL1P53675 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLTCL1P53675 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC31.13■■■□□ 2.57
CLTCL1P53675 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC31.13■■■□□ 2.57
CLTCL1P53675 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLTCL1P53675 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
CLTCL1P53675 CYP2T1P-201ENST00000432607 1285 ntBASIC31.13■■■□□ 2.57
CLTCL1P53675 AC010536.3-201ENST00000620306 533 ntBASIC31.13■■■□□ 2.57
CLTCL1P53675 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLTCL1P53675 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLTCL1P53675 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLTCL1P53675 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
CLTCL1P53675 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLTCL1P53675 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CLTCL1P53675 FXN-202ENST00000396364 980 ntTSL 5 BASIC31.12■■■□□ 2.57
CLTCL1P53675 AC007322.1-201ENST00000426983 750 ntBASIC31.12■■■□□ 2.57
CLTCL1P53675 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CLTCL1P53675 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
CLTCL1P53675 AL138781.1-201ENST00000566567 1274 ntBASIC31.12■■■□□ 2.57
CLTCL1P53675 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
CLTCL1P53675 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CLTCL1P53675 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CLTCL1P53675 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CLTCL1P53675 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CLTCL1P53675 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CLTCL1P53675 NAA20-201ENST00000310450 920 ntTSL 2 BASIC31.11■■■□□ 2.57
CLTCL1P53675 KRT18P20-201ENST00000548986 1279 ntBASIC31.11■■■□□ 2.57
CLTCL1P53675 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CLTCL1P53675 AC087742.1-201ENST00000575880 1738 ntBASIC31.11■■■□□ 2.57
CLTCL1P53675 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
CLTCL1P53675 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CLTCL1P53675 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
CLTCL1P53675 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.1■■■□□ 2.57
CLTCL1P53675 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CLTCL1P53675 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
CLTCL1P53675 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CLTCL1P53675 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC31.1■■■□□ 2.57
CLTCL1P53675 PARP1-210ENST00000629232 477 ntTSL 5 BASIC31.1■■■□□ 2.57
CLTCL1P53675 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CLTCL1P53675 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
CLTCL1P53675 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC31.09■■■□□ 2.57
CLTCL1P53675 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC31.09■■■□□ 2.57
CLTCL1P53675 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CLTCL1P53675 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
CLTCL1P53675 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC31.09■■■□□ 2.57
CLTCL1P53675 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CLTCL1P53675 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms