Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDR1P51861 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.4■■□□□ 1.34
CDR1P51861 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.4■■□□□ 1.34
CDR1P51861 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.4■■□□□ 1.34
CDR1P51861 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDR1P51861 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.4■■□□□ 1.34
CDR1P51861 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDR1P51861 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDR1P51861 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDR1P51861 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CDR1P51861 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDR1P51861 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDR1P51861 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDR1P51861 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDR1P51861 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
CDR1P51861 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.39■■□□□ 1.34
CDR1P51861 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDR1P51861 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDR1P51861 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.39■■□□□ 1.33
CDR1P51861 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDR1P51861 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDR1P51861 AC092666.2-201ENST00000613287 246 ntBASIC23.39■■□□□ 1.33
CDR1P51861 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDR1P51861 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDR1P51861 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDR1P51861 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDR1P51861 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDR1P51861 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.38■■□□□ 1.33
CDR1P51861 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDR1P51861 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDR1P51861 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDR1P51861 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.38■■□□□ 1.33
CDR1P51861 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDR1P51861 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDR1P51861 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.38■■□□□ 1.33
CDR1P51861 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.38■■□□□ 1.33
CDR1P51861 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.38■■□□□ 1.33
CDR1P51861 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.38■■□□□ 1.33
CDR1P51861 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
CDR1P51861 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CDR1P51861 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDR1P51861 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDR1P51861 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CDR1P51861 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDR1P51861 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDR1P51861 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CDR1P51861 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDR1P51861 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDR1P51861 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.37■■□□□ 1.33
CDR1P51861 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
CDR1P51861 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDR1P51861 AC097381.1-201ENST00000429019 1296 ntBASIC23.37■■□□□ 1.33
CDR1P51861 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDR1P51861 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.37■■□□□ 1.33
CDR1P51861 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CDR1P51861 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDR1P51861 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.36■■□□□ 1.33
CDR1P51861 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDR1P51861 AC137767.1-201ENST00000602918 1920 ntBASIC23.36■■□□□ 1.33
CDR1P51861 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.36■■□□□ 1.33
CDR1P51861 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDR1P51861 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.36■■□□□ 1.33
CDR1P51861 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.36■■□□□ 1.33
CDR1P51861 MIR5787-201ENST00000611784 55 ntBASIC23.36■■□□□ 1.33
CDR1P51861 MIR6821-201ENST00000617625 74 ntBASIC23.36■■□□□ 1.33
CDR1P51861 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.36■■□□□ 1.33
CDR1P51861 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.36■■□□□ 1.33
CDR1P51861 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDR1P51861 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDR1P51861 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.36■■□□□ 1.33
CDR1P51861 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDR1P51861 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.36■■□□□ 1.33
CDR1P51861 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDR1P51861 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CDR1P51861 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDR1P51861 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDR1P51861 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDR1P51861 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDR1P51861 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.35■■□□□ 1.33
CDR1P51861 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDR1P51861 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CDR1P51861 LINC00526-201ENST00000581067 1875 ntBASIC23.35■■□□□ 1.33
CDR1P51861 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CDR1P51861 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CDR1P51861 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CDR1P51861 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.35■■□□□ 1.33
CDR1P51861 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDR1P51861 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDR1P51861 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.35■■□□□ 1.33
CDR1P51861 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.34■■□□□ 1.33
CDR1P51861 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.34■■□□□ 1.33
CDR1P51861 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
CDR1P51861 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
CDR1P51861 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDR1P51861 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDR1P51861 AC092068.2-201ENST00000590491 1708 ntBASIC23.34■■□□□ 1.33
CDR1P51861 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CDR1P51861 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
CDR1P51861 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.34■■□□□ 1.33
CDR1P51861 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms