Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.91■□□□□ 0.62
CX3CR1P49238 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.91■□□□□ 0.62
CX3CR1P49238 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CX3CR1P49238 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CX3CR1P49238 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CX3CR1P49238 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CX3CR1P49238 SERBP1P1-201ENST00000396021 1160 ntBASIC18.9■□□□□ 0.62
CX3CR1P49238 AC131281.2-201ENST00000520478 145 ntBASIC18.9■□□□□ 0.62
CX3CR1P49238 DUX4L19-201ENST00000557448 1267 ntBASIC18.9■□□□□ 0.62
CX3CR1P49238 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.9■□□□□ 0.62
CX3CR1P49238 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.9■□□□□ 0.62
CX3CR1P49238 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CX3CR1P49238 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CX3CR1P49238 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CX3CR1P49238 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CX3CR1P49238 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CX3CR1P49238 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.89■□□□□ 0.62
CX3CR1P49238 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CX3CR1P49238 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CX3CR1P49238 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CX3CR1P49238 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CX3CR1P49238 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CX3CR1P49238 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.89■□□□□ 0.61
CX3CR1P49238 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CX3CR1P49238 AC087239.1-201ENST00000622671 572 ntBASIC18.89■□□□□ 0.61
CX3CR1P49238 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.89■□□□□ 0.61
CX3CR1P49238 AC010542.4-201ENST00000563151 1910 ntBASIC18.89■□□□□ 0.61
CX3CR1P49238 FAM99A-202ENST00000538190 1989 ntBASIC18.89■□□□□ 0.61
CX3CR1P49238 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CX3CR1P49238 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CX3CR1P49238 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.89■□□□□ 0.61
CX3CR1P49238 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CX3CR1P49238 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CX3CR1P49238 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CX3CR1P49238 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CX3CR1P49238 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CX3CR1P49238 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CX3CR1P49238 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CX3CR1P49238 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CX3CR1P49238 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.88■□□□□ 0.61
CX3CR1P49238 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
CX3CR1P49238 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CX3CR1P49238 AC010525.1-201ENST00000585559 441 ntBASIC18.88■□□□□ 0.61
CX3CR1P49238 AL138724.1-201ENST00000606771 1088 ntBASIC18.88■□□□□ 0.61
CX3CR1P49238 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.88■□□□□ 0.61
CX3CR1P49238 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CX3CR1P49238 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CX3CR1P49238 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CX3CR1P49238 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.88■□□□□ 0.61
CX3CR1P49238 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.88■□□□□ 0.61
CX3CR1P49238 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CX3CR1P49238 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CX3CR1P49238 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CX3CR1P49238 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CX3CR1P49238 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.87■□□□□ 0.61
CX3CR1P49238 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CX3CR1P49238 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.87■□□□□ 0.61
CX3CR1P49238 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CX3CR1P49238 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CX3CR1P49238 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CX3CR1P49238 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.87■□□□□ 0.61
CX3CR1P49238 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CX3CR1P49238 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CX3CR1P49238 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CX3CR1P49238 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CX3CR1P49238 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CX3CR1P49238 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CX3CR1P49238 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CX3CR1P49238 OR7E47P-201ENST00000546390 1422 ntBASIC18.86■□□□□ 0.61
CX3CR1P49238 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CX3CR1P49238 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.86■□□□□ 0.61
CX3CR1P49238 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.86■□□□□ 0.61
CX3CR1P49238 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CX3CR1P49238 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.86■□□□□ 0.61
CX3CR1P49238 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CX3CR1P49238 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CX3CR1P49238 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CX3CR1P49238 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CX3CR1P49238 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CX3CR1P49238 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CX3CR1P49238 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.85■□□□□ 0.61
CX3CR1P49238 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.85■□□□□ 0.61
CX3CR1P49238 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CX3CR1P49238 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CX3CR1P49238 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CX3CR1P49238 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.85■□□□□ 0.61
CX3CR1P49238 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CX3CR1P49238 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CX3CR1P49238 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.85■□□□□ 0.61
CX3CR1P49238 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CX3CR1P49238 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
CX3CR1P49238 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.85■□□□□ 0.61
CX3CR1P49238 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.85■□□□□ 0.61
CX3CR1P49238 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CX3CR1P49238 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.85■□□□□ 0.61
CX3CR1P49238 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CX3CR1P49238 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.85■□□□□ 0.61
CX3CR1P49238 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CX3CR1P49238 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
CX3CR1P49238 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms