Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.55■□□□□ 0.88
SSR2P43308 AL136967.2-201ENST00000623968 743 ntBASIC20.55■□□□□ 0.88
SSR2P43308 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SSR2P43308 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SSR2P43308 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSR2P43308 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SSR2P43308 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.54■□□□□ 0.88
SSR2P43308 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR2P43308 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR2P43308 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SSR2P43308 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
SSR2P43308 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR2P43308 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSR2P43308 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SSR2P43308 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR2P43308 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR2P43308 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.54■□□□□ 0.88
SSR2P43308 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
SSR2P43308 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR2P43308 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SSR2P43308 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR2P43308 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR2P43308 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSR2P43308 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR2P43308 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR2P43308 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.53■□□□□ 0.88
SSR2P43308 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.53■□□□□ 0.88
SSR2P43308 SUDS3P1-201ENST00000505831 966 ntBASIC20.53■□□□□ 0.88
SSR2P43308 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.53■□□□□ 0.88
SSR2P43308 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.53■□□□□ 0.88
SSR2P43308 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.53■□□□□ 0.88
SSR2P43308 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.53■□□□□ 0.88
SSR2P43308 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSR2P43308 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSR2P43308 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR2P43308 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR2P43308 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.53■□□□□ 0.88
SSR2P43308 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSR2P43308 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR2P43308 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR2P43308 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SSR2P43308 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSR2P43308 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSR2P43308 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SSR2P43308 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR2P43308 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.52■□□□□ 0.88
SSR2P43308 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSR2P43308 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSR2P43308 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.52■□□□□ 0.88
SSR2P43308 AC005837.3-201ENST00000612163 286 ntBASIC20.52■□□□□ 0.88
SSR2P43308 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
SSR2P43308 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSR2P43308 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSR2P43308 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR2P43308 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
SSR2P43308 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
SSR2P43308 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR2P43308 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.51■□□□□ 0.87
SSR2P43308 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR2P43308 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR2P43308 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.51■□□□□ 0.87
SSR2P43308 MIR638-201ENST00000385237 100 ntBASIC20.51■□□□□ 0.87
SSR2P43308 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.51■□□□□ 0.87
SSR2P43308 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR2P43308 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR2P43308 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR2P43308 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR2P43308 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.51■□□□□ 0.87
SSR2P43308 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR2P43308 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR2P43308 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.51■□□□□ 0.87
SSR2P43308 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.51■□□□□ 0.87
SSR2P43308 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.5■□□□□ 0.87
SSR2P43308 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR2P43308 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSR2P43308 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.5■□□□□ 0.87
SSR2P43308 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SSR2P43308 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SSR2P43308 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR2P43308 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR2P43308 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.5■□□□□ 0.87
SSR2P43308 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.5■□□□□ 0.87
SSR2P43308 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.5■□□□□ 0.87
SSR2P43308 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSR2P43308 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SSR2P43308 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR2P43308 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR2P43308 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR2P43308 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR2P43308 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR2P43308 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SSR2P43308 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms