Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.42■■□□□ 1.5
CLCN1P35523 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN1P35523 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CLCN1P35523 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC24.41■■□□□ 1.5
CLCN1P35523 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.41■■□□□ 1.5
CLCN1P35523 ALDH1A3-203ENST00000557963 1670 ntBASIC24.41■■□□□ 1.5
CLCN1P35523 AC004448.1-201ENST00000458332 883 ntBASIC24.41■■□□□ 1.5
CLCN1P35523 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.41■■□□□ 1.5
CLCN1P35523 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CLCN1P35523 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.41■■□□□ 1.5
CLCN1P35523 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLCN1P35523 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.41■■□□□ 1.5
CLCN1P35523 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
CLCN1P35523 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.4■■□□□ 1.5
CLCN1P35523 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.4■■□□□ 1.5
CLCN1P35523 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CLCN1P35523 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
CLCN1P35523 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN1P35523 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.4■■□□□ 1.5
CLCN1P35523 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CLCN1P35523 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.39■■□□□ 1.5
CLCN1P35523 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
CLCN1P35523 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CLCN1P35523 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.39■■□□□ 1.49
CLCN1P35523 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.39■■□□□ 1.49
CLCN1P35523 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
CLCN1P35523 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLCN1P35523 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLCN1P35523 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLCN1P35523 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLCN1P35523 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CLCN1P35523 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CLCN1P35523 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CLCN1P35523 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLCN1P35523 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.38■■□□□ 1.49
CLCN1P35523 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
CLCN1P35523 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CLCN1P35523 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLCN1P35523 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLCN1P35523 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLCN1P35523 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CLCN1P35523 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLCN1P35523 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CLCN1P35523 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CLCN1P35523 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
CLCN1P35523 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLCN1P35523 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.37■■□□□ 1.49
CLCN1P35523 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CLCN1P35523 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CLCN1P35523 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLCN1P35523 RARRES2P1-201ENST00000474487 481 ntBASIC24.37■■□□□ 1.49
CLCN1P35523 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.37■■□□□ 1.49
CLCN1P35523 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLCN1P35523 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLCN1P35523 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC24.37■■□□□ 1.49
CLCN1P35523 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLCN1P35523 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC24.37■■□□□ 1.49
CLCN1P35523 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.37■■□□□ 1.49
CLCN1P35523 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CLCN1P35523 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLCN1P35523 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLCN1P35523 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.36■■□□□ 1.49
CLCN1P35523 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.36■■□□□ 1.49
CLCN1P35523 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
CLCN1P35523 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.36■■□□□ 1.49
CLCN1P35523 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLCN1P35523 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLCN1P35523 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
CLCN1P35523 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
CLCN1P35523 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLCN1P35523 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLCN1P35523 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.35■■□□□ 1.49
CLCN1P35523 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CLCN1P35523 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLCN1P35523 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.35■■□□□ 1.49
CLCN1P35523 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CLCN1P35523 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLCN1P35523 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLCN1P35523 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLCN1P35523 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLCN1P35523 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CLCN1P35523 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CLCN1P35523 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLCN1P35523 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLCN1P35523 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLCN1P35523 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLCN1P35523 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.34■■□□□ 1.49
CLCN1P35523 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CLCN1P35523 SNX5-217ENST00000606557 1087 ntBASIC24.34■■□□□ 1.49
CLCN1P35523 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms