Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAP31040 SERBP1P1-201ENST00000396021 1160 ntBASIC19.3■□□□□ 0.68
SDHAP31040 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SDHAP31040 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.3■□□□□ 0.68
SDHAP31040 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAP31040 AC026310.3-201ENST00000625186 2373 ntBASIC19.3■□□□□ 0.68
SDHAP31040 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SDHAP31040 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAP31040 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.29■□□□□ 0.68
SDHAP31040 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.29■□□□□ 0.68
SDHAP31040 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAP31040 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAP31040 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAP31040 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAP31040 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SDHAP31040 AC010525.1-201ENST00000585559 441 ntBASIC19.29■□□□□ 0.68
SDHAP31040 AL137060.1-201ENST00000618151 2648 ntBASIC19.29■□□□□ 0.68
SDHAP31040 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHAP31040 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAP31040 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.28■□□□□ 0.68
SDHAP31040 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SDHAP31040 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SDHAP31040 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAP31040 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SDHAP31040 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAP31040 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAP31040 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SDHAP31040 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.27■□□□□ 0.68
SDHAP31040 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHAP31040 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.27■□□□□ 0.68
SDHAP31040 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.27■□□□□ 0.68
SDHAP31040 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SDHAP31040 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.27■□□□□ 0.68
SDHAP31040 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SDHAP31040 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHAP31040 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.27■□□□□ 0.68
SDHAP31040 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.27■□□□□ 0.68
SDHAP31040 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHAP31040 AC131281.2-201ENST00000520478 145 ntBASIC19.27■□□□□ 0.68
SDHAP31040 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.27■□□□□ 0.68
SDHAP31040 AC011298.3-201ENST00000615796 283 ntBASIC19.27■□□□□ 0.68
SDHAP31040 AC136469.2-201ENST00000623944 1028 ntBASIC19.27■□□□□ 0.68
SDHAP31040 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.27■□□□□ 0.68
SDHAP31040 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.27■□□□□ 0.68
SDHAP31040 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.27■□□□□ 0.68
SDHAP31040 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SDHAP31040 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SDHAP31040 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SDHAP31040 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.67
SDHAP31040 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.27■□□□□ 0.67
SDHAP31040 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SDHAP31040 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAP31040 OXCT2P1-201ENST00000447263 1535 ntBASIC19.26■□□□□ 0.67
SDHAP31040 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SDHAP31040 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAP31040 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.26■□□□□ 0.67
SDHAP31040 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.26■□□□□ 0.67
SDHAP31040 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHAP31040 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAP31040 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.25■□□□□ 0.67
SDHAP31040 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.25■□□□□ 0.67
SDHAP31040 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAP31040 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SDHAP31040 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAP31040 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAP31040 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAP31040 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SDHAP31040 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SDHAP31040 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SDHAP31040 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.25■□□□□ 0.67
SDHAP31040 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAP31040 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SDHAP31040 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.25■□□□□ 0.67
SDHAP31040 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SDHAP31040 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SDHAP31040 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SDHAP31040 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAP31040 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAP31040 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAP31040 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAP31040 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAP31040 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAP31040 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SDHAP31040 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.24■□□□□ 0.67
SDHAP31040 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.24■□□□□ 0.67
SDHAP31040 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAP31040 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAP31040 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SDHAP31040 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAP31040 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SDHAP31040 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.24■□□□□ 0.67
SDHAP31040 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHAP31040 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SDHAP31040 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.23■□□□□ 0.67
SDHAP31040 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.23■□□□□ 0.67
SDHAP31040 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAP31040 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAP31040 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAP31040 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAP31040 AL024507.2-201ENST00000606070 2574 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms