Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HTR1EP28566 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
HTR1EP28566 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HTR1EP28566 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
HTR1EP28566 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.58■□□□□ 0.88
HTR1EP28566 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HTR1EP28566 SLC25A24-204ENST00000569674 2357 ntBASIC20.58■□□□□ 0.88
HTR1EP28566 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HTR1EP28566 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HTR1EP28566 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.57■□□□□ 0.88
HTR1EP28566 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.57■□□□□ 0.88
HTR1EP28566 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.57■□□□□ 0.88
HTR1EP28566 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HTR1EP28566 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
HTR1EP28566 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.57■□□□□ 0.88
HTR1EP28566 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
HTR1EP28566 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HTR1EP28566 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
HTR1EP28566 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR1EP28566 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.56■□□□□ 0.88
HTR1EP28566 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
HTR1EP28566 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.56■□□□□ 0.88
HTR1EP28566 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HTR1EP28566 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR1EP28566 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1EP28566 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
HTR1EP28566 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1EP28566 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1EP28566 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1EP28566 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1EP28566 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.55■□□□□ 0.88
HTR1EP28566 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HTR1EP28566 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1EP28566 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.55■□□□□ 0.88
HTR1EP28566 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.55■□□□□ 0.88
HTR1EP28566 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1EP28566 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTR1EP28566 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1EP28566 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
HTR1EP28566 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.54■□□□□ 0.88
HTR1EP28566 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.54■□□□□ 0.88
HTR1EP28566 AL136967.2-201ENST00000623968 743 ntBASIC20.54■□□□□ 0.88
HTR1EP28566 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HTR1EP28566 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.54■□□□□ 0.88
HTR1EP28566 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
HTR1EP28566 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HTR1EP28566 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1EP28566 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR1EP28566 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1EP28566 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1EP28566 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HTR1EP28566 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1EP28566 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1EP28566 AF213884.3-201ENST00000563833 479 ntBASIC20.53■□□□□ 0.88
HTR1EP28566 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.53■□□□□ 0.88
HTR1EP28566 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1EP28566 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.53■□□□□ 0.88
HTR1EP28566 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1EP28566 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.53■□□□□ 0.88
HTR1EP28566 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1EP28566 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1EP28566 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.53■□□□□ 0.88
HTR1EP28566 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
HTR1EP28566 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR1EP28566 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR1EP28566 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.52■□□□□ 0.88
HTR1EP28566 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR1EP28566 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.52■□□□□ 0.88
HTR1EP28566 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HTR1EP28566 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.52■□□□□ 0.88
HTR1EP28566 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.52■□□□□ 0.88
HTR1EP28566 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HTR1EP28566 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR1EP28566 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms