Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 AL137060.1-201ENST00000618151 2648 ntBASIC21.09■□□□□ 0.97
VARSP26640 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.09■□□□□ 0.97
VARSP26640 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.09■□□□□ 0.97
VARSP26640 AC011298.3-201ENST00000615796 283 ntBASIC21.09■□□□□ 0.97
VARSP26640 AC136469.2-201ENST00000623944 1028 ntBASIC21.09■□□□□ 0.97
VARSP26640 AL136967.2-201ENST00000623968 743 ntBASIC21.09■□□□□ 0.97
VARSP26640 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARSP26640 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VARSP26640 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VARSP26640 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
VARSP26640 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
VARSP26640 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VARSP26640 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VARSP26640 OR2I1P-207ENST00000453522 948 ntBASIC21.08■□□□□ 0.97
VARSP26640 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.08■□□□□ 0.97
VARSP26640 MIR6821-201ENST00000617625 74 ntBASIC21.08■□□□□ 0.97
VARSP26640 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.08■□□□□ 0.96
VARSP26640 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
VARSP26640 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VARSP26640 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VARSP26640 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
VARSP26640 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
VARSP26640 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
VARSP26640 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARSP26640 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.07■□□□□ 0.96
VARSP26640 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.07■□□□□ 0.96
VARSP26640 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.07■□□□□ 0.96
VARSP26640 AL031602.1-201ENST00000633169 911 ntBASIC21.07■□□□□ 0.96
VARSP26640 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARSP26640 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VARSP26640 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
VARSP26640 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VARSP26640 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARSP26640 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VARSP26640 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARSP26640 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.06■□□□□ 0.96
VARSP26640 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VARSP26640 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARSP26640 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
VARSP26640 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
VARSP26640 MIR939-201ENST00000401314 82 ntBASIC21.06■□□□□ 0.96
VARSP26640 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.06■□□□□ 0.96
VARSP26640 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.06■□□□□ 0.96
VARSP26640 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VARSP26640 AF213884.3-201ENST00000563833 479 ntBASIC21.06■□□□□ 0.96
VARSP26640 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARSP26640 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARSP26640 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARSP26640 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARSP26640 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.06■□□□□ 0.96
VARSP26640 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VARSP26640 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VARSP26640 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.05■□□□□ 0.96
VARSP26640 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.05■□□□□ 0.96
VARSP26640 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VARSP26640 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VARSP26640 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.05■□□□□ 0.96
VARSP26640 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.05■□□□□ 0.96
VARSP26640 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VARSP26640 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.05■□□□□ 0.96
VARSP26640 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VARSP26640 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VARSP26640 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VARSP26640 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VARSP26640 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VARSP26640 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VARSP26640 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.04■□□□□ 0.96
VARSP26640 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
VARSP26640 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
VARSP26640 AC097381.1-201ENST00000429019 1296 ntBASIC21.04■□□□□ 0.96
VARSP26640 SLC47A1P1-202ENST00000449666 945 ntBASIC21.04■□□□□ 0.96
VARSP26640 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.04■□□□□ 0.96
VARSP26640 MIR4767-201ENST00000582827 78 ntBASIC21.04■□□□□ 0.96
VARSP26640 CA15P2-201ENST00000611168 834 ntBASIC21.04■□□□□ 0.96
VARSP26640 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.04■□□□□ 0.96
VARSP26640 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VARSP26640 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms