Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP24386 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 MIR939-201ENST00000401314 82 ntBASIC20.07■□□□□ 0.8
CHMP24386 AP001330.3-201ENST00000520123 633 ntBASIC20.07■□□□□ 0.8
CHMP24386 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHMP24386 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CHMP24386 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP24386 AL136967.2-201ENST00000623968 743 ntBASIC20.07■□□□□ 0.8
CHMP24386 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP24386 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP24386 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP24386 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP24386 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP24386 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP24386 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP24386 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP24386 AC091305.1-201ENST00000479476 895 ntBASIC20.06■□□□□ 0.8
CHMP24386 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.06■□□□□ 0.8
CHMP24386 AF213884.3-201ENST00000563833 479 ntBASIC20.06■□□□□ 0.8
CHMP24386 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP24386 FAM99A-202ENST00000538190 1989 ntBASIC20.06■□□□□ 0.8
CHMP24386 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP24386 AC010542.4-201ENST00000563151 1910 ntBASIC20.06■□□□□ 0.8
CHMP24386 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP24386 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP24386 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP24386 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP24386 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP24386 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP24386 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.05■□□□□ 0.8
CHMP24386 BX842568.3-201ENST00000418104 571 ntBASIC20.05■□□□□ 0.8
CHMP24386 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.05■□□□□ 0.8
CHMP24386 AC027682.1-201ENST00000562846 899 ntBASIC20.05■□□□□ 0.8
CHMP24386 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP24386 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP24386 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP24386 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.05■□□□□ 0.8
CHMP24386 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CHMP24386 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CHMP24386 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP24386 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHMP24386 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP24386 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP24386 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP24386 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHMP24386 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP24386 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.04■□□□□ 0.8
CHMP24386 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.04■□□□□ 0.8
CHMP24386 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP24386 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CHMP24386 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP24386 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP24386 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP24386 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP24386 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.04■□□□□ 0.8
CHMP24386 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP24386 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP24386 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP24386 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP24386 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHMP24386 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP24386 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP24386 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP24386 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CHMP24386 AC233992.3-201ENST00000607491 485 ntBASIC20.03■□□□□ 0.8
CHMP24386 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP24386 RASA4CP-201ENST00000424092 1398 ntBASIC20.03■□□□□ 0.8
CHMP24386 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP24386 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP24386 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP24386 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHMP24386 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP24386 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP24386 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP24386 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP24386 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CHMP24386 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CHMP24386 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP24386 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CHMP24386 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP24386 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP24386 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP24386 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.02■□□□□ 0.79
CHMP24386 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP24386 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.02■□□□□ 0.79
CHMP24386 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP24386 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP24386 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP24386 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP24386 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP24386 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP24386 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms