Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
XPAP23025 DUX4L2-201ENST00000561772 1275 ntBASIC21.68■■□□□ 1.06
XPAP23025 AC104564.3-201ENST00000582367 638 ntBASIC21.68■■□□□ 1.06
XPAP23025 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
XPAP23025 DUX4L6-201ENST00000626483 1275 ntBASIC21.68■■□□□ 1.06
XPAP23025 DUX4L1-201ENST00000627662 1275 ntBASIC21.68■■□□□ 1.06
XPAP23025 DUX4L8-201ENST00000629013 1275 ntBASIC21.68■■□□□ 1.06
XPAP23025 DUX4L3-201ENST00000630187 1275 ntBASIC21.68■■□□□ 1.06
XPAP23025 DUX4L7-201ENST00000630678 1275 ntBASIC21.68■■□□□ 1.06
XPAP23025 DUX4L5-201ENST00000630834 1275 ntBASIC21.68■■□□□ 1.06
XPAP23025 AC009237.3-201ENST00000393279 1427 ntBASIC21.68■■□□□ 1.06
XPAP23025 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.68■■□□□ 1.06
XPAP23025 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
XPAP23025 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
XPAP23025 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XPAP23025 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
XPAP23025 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.68■■□□□ 1.06
XPAP23025 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XPAP23025 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XPAP23025 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
XPAP23025 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.67■■□□□ 1.06
XPAP23025 C1orf229-201ENST00000623686 2258 ntBASIC21.67■■□□□ 1.06
XPAP23025 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 AP004607.7-201ENST00000527152 1677 ntBASIC21.67■■□□□ 1.06
XPAP23025 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.67■■□□□ 1.06
XPAP23025 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
XPAP23025 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.67■■□□□ 1.06
XPAP23025 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
XPAP23025 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
XPAP23025 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.67■■□□□ 1.06
XPAP23025 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
XPAP23025 AL034346.1-201ENST00000568244 1277 ntBASIC21.67■■□□□ 1.06
XPAP23025 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.67■■□□□ 1.06
XPAP23025 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.67■■□□□ 1.06
XPAP23025 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
XPAP23025 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.67■■□□□ 1.06
XPAP23025 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XPAP23025 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.66■■□□□ 1.06
XPAP23025 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XPAP23025 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.66■■□□□ 1.06
XPAP23025 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.66■■□□□ 1.06
XPAP23025 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
XPAP23025 AC137767.1-201ENST00000602918 1920 ntBASIC21.66■■□□□ 1.06
XPAP23025 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XPAP23025 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
XPAP23025 LINC00526-201ENST00000581067 1875 ntBASIC21.66■■□□□ 1.06
XPAP23025 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XPAP23025 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
XPAP23025 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
XPAP23025 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.65■■□□□ 1.06
XPAP23025 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
XPAP23025 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
XPAP23025 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
XPAP23025 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
XPAP23025 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
XPAP23025 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
XPAP23025 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
XPAP23025 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.65■■□□□ 1.06
XPAP23025 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.65■■□□□ 1.06
XPAP23025 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
XPAP23025 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
XPAP23025 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
XPAP23025 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
XPAP23025 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
XPAP23025 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
XPAP23025 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
XPAP23025 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
XPAP23025 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.64■■□□□ 1.05
XPAP23025 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
XPAP23025 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
XPAP23025 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
XPAP23025 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.64■■□□□ 1.05
XPAP23025 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
XPAP23025 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
XPAP23025 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
XPAP23025 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
XPAP23025 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XPAP23025 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
XPAP23025 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XPAP23025 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XPAP23025 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
XPAP23025 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.63■■□□□ 1.05
XPAP23025 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.63■■□□□ 1.05
XPAP23025 NTF6G-201ENST00000591094 616 ntBASIC21.63■■□□□ 1.05
XPAP23025 AC092666.2-201ENST00000613287 246 ntBASIC21.63■■□□□ 1.05
XPAP23025 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.63■■□□□ 1.05
XPAP23025 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.63■■□□□ 1.05
XPAP23025 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XPAP23025 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XPAP23025 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XPAP23025 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms