Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3BP20337 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3BP20337 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
RAB3BP20337 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3BP20337 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3BP20337 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3BP20337 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB3BP20337 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB3BP20337 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RAB3BP20337 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3BP20337 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3BP20337 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3BP20337 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
RAB3BP20337 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB3BP20337 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.82■□□□□ 0.6
RAB3BP20337 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3BP20337 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3BP20337 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3BP20337 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RAB3BP20337 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3BP20337 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB3BP20337 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB3BP20337 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3BP20337 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB3BP20337 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB3BP20337 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3BP20337 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3BP20337 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
RAB3BP20337 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RAB3BP20337 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3BP20337 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RAB3BP20337 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB3BP20337 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAB3BP20337 AC005703.6-201ENST00000623265 1329 ntBASIC18.81■□□□□ 0.6
RAB3BP20337 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB3BP20337 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB3BP20337 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB3BP20337 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB3BP20337 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.81■□□□□ 0.6
RAB3BP20337 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAB3BP20337 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB3BP20337 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RAB3BP20337 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB3BP20337 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3BP20337 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB3BP20337 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3BP20337 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB3BP20337 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3BP20337 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3BP20337 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB3BP20337 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB3BP20337 AC074183.2-201ENST00000623112 922 ntBASIC18.8■□□□□ 0.6
RAB3BP20337 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB3BP20337 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RAB3BP20337 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RAB3BP20337 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3BP20337 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3BP20337 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3BP20337 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3BP20337 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3BP20337 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RAB3BP20337 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3BP20337 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB3BP20337 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3BP20337 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB3BP20337 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3BP20337 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB3BP20337 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3BP20337 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3BP20337 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3BP20337 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3BP20337 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB3BP20337 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3BP20337 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3BP20337 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3BP20337 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3BP20337 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3BP20337 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
RAB3BP20337 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3BP20337 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB3BP20337 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3BP20337 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RAB3BP20337 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3BP20337 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3BP20337 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RAB3BP20337 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3BP20337 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3BP20337 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB3BP20337 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3BP20337 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms