Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HIST1H1DP16402 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
HIST1H1DP16402 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HIST1H1DP16402 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HIST1H1DP16402 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HIST1H1DP16402 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HIST1H1DP16402 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HIST1H1DP16402 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HIST1H1DP16402 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.25■□□□□ 0.51
HIST1H1DP16402 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.25■□□□□ 0.51
HIST1H1DP16402 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.25■□□□□ 0.51
HIST1H1DP16402 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.25■□□□□ 0.51
HIST1H1DP16402 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.25■□□□□ 0.51
HIST1H1DP16402 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HIST1H1DP16402 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST1H1DP16402 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HIST1H1DP16402 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HIST1H1DP16402 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST1H1DP16402 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
HIST1H1DP16402 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.24■□□□□ 0.51
HIST1H1DP16402 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.24■□□□□ 0.51
HIST1H1DP16402 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST1H1DP16402 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HIST1H1DP16402 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
HIST1H1DP16402 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST1H1DP16402 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1DP16402 AC073130.3-201ENST00000624389 2278 ntBASIC18.23■□□□□ 0.51
HIST1H1DP16402 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1DP16402 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1DP16402 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1DP16402 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HIST1H1DP16402 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST1H1DP16402 KRT125P-201ENST00000546827 989 ntBASIC18.23■□□□□ 0.51
HIST1H1DP16402 AL031602.1-201ENST00000633169 911 ntBASIC18.23■□□□□ 0.51
HIST1H1DP16402 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1DP16402 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1DP16402 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HIST1H1DP16402 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1DP16402 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H1DP16402 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.22■□□□□ 0.51
HIST1H1DP16402 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1DP16402 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1DP16402 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.22■□□□□ 0.51
HIST1H1DP16402 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1DP16402 AC079089.2-201ENST00000531211 1277 ntBASIC18.22■□□□□ 0.51
HIST1H1DP16402 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1DP16402 AC104564.3-201ENST00000582367 638 ntBASIC18.22■□□□□ 0.51
HIST1H1DP16402 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
HIST1H1DP16402 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.22■□□□□ 0.51
HIST1H1DP16402 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.22■□□□□ 0.51
HIST1H1DP16402 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1DP16402 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1DP16402 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1DP16402 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
HIST1H1DP16402 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1DP16402 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HIST1H1DP16402 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1DP16402 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HIST1H1DP16402 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H1DP16402 AC026471.6-201ENST00000622954 1905 ntBASIC18.21■□□□□ 0.51
HIST1H1DP16402 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
HIST1H1DP16402 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H1DP16402 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST1H1DP16402 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST1H1DP16402 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST1H1DP16402 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.21■□□□□ 0.51
HIST1H1DP16402 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H1DP16402 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H1DP16402 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H1DP16402 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST1H1DP16402 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H1DP16402 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST1H1DP16402 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms