Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBP1P09455 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.21■□□□□ 0.99
RBP1P09455 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBP1P09455 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.21■□□□□ 0.99
RBP1P09455 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.21■□□□□ 0.99
RBP1P09455 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.21■□□□□ 0.99
RBP1P09455 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RBP1P09455 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBP1P09455 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBP1P09455 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.21■□□□□ 0.99
RBP1P09455 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RBP1P09455 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RBP1P09455 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.21■□□□□ 0.99
RBP1P09455 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.21■□□□□ 0.99
RBP1P09455 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.21■□□□□ 0.99
RBP1P09455 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBP1P09455 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.21■□□□□ 0.99
RBP1P09455 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RBP1P09455 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
RBP1P09455 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.2■□□□□ 0.98
RBP1P09455 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RBP1P09455 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.2■□□□□ 0.98
RBP1P09455 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.2■□□□□ 0.98
RBP1P09455 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RBP1P09455 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBP1P09455 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBP1P09455 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RBP1P09455 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBP1P09455 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
RBP1P09455 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBP1P09455 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RBP1P09455 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
RBP1P09455 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBP1P09455 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBP1P09455 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBP1P09455 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBP1P09455 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
RBP1P09455 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.19■□□□□ 0.98
RBP1P09455 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.19■□□□□ 0.98
RBP1P09455 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.19■□□□□ 0.98
RBP1P09455 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RBP1P09455 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBP1P09455 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.19■□□□□ 0.98
RBP1P09455 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBP1P09455 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBP1P09455 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RBP1P09455 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBP1P09455 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
RBP1P09455 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBP1P09455 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RBP1P09455 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBP1P09455 AC010141.3-201ENST00000456659 717 ntBASIC21.18■□□□□ 0.98
RBP1P09455 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.18■□□□□ 0.98
RBP1P09455 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RBP1P09455 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RBP1P09455 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBP1P09455 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBP1P09455 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RBP1P09455 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.17■□□□□ 0.98
RBP1P09455 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.17■□□□□ 0.98
RBP1P09455 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBP1P09455 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RBP1P09455 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBP1P09455 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.17■□□□□ 0.98
RBP1P09455 AC104564.3-201ENST00000582367 638 ntBASIC21.17■□□□□ 0.98
RBP1P09455 AL512631.2-201ENST00000604634 923 ntBASIC21.17■□□□□ 0.98
RBP1P09455 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBP1P09455 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RBP1P09455 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBP1P09455 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
RBP1P09455 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RBP1P09455 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.17■□□□□ 0.98
RBP1P09455 Z98882.1-201ENST00000622160 2253 ntBASIC21.17■□□□□ 0.98
RBP1P09455 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBP1P09455 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBP1P09455 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.16■□□□□ 0.98
RBP1P09455 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.16■□□□□ 0.98
RBP1P09455 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RBP1P09455 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.16■□□□□ 0.98
RBP1P09455 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RBP1P09455 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RBP1P09455 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.15■□□□□ 0.98
RBP1P09455 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RBP1P09455 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.15■□□□□ 0.98
RBP1P09455 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.15■□□□□ 0.98
RBP1P09455 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.15■□□□□ 0.98
RBP1P09455 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBP1P09455 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.15■□□□□ 0.98
RBP1P09455 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RBP1P09455 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RBP1P09455 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.14■□□□□ 0.98
RBP1P09455 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RBP1P09455 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RBP1P09455 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.14■□□□□ 0.97
RBP1P09455 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBP1P09455 AL138724.1-201ENST00000606771 1088 ntBASIC21.14■□□□□ 0.97
RBP1P09455 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RBP1P09455 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBP1P09455 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.14■□□□□ 0.97
RBP1P09455 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms