Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A2P08572 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.01■■□□□ 1.11
COL4A2P08572 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.01■■□□□ 1.11
COL4A2P08572 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.01■■□□□ 1.11
COL4A2P08572 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A2P08572 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A2P08572 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A2P08572 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A2P08572 AP006587.3-201ENST00000525742 1516 ntBASIC22.01■■□□□ 1.11
COL4A2P08572 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22■■□□□ 1.11
COL4A2P08572 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22■■□□□ 1.11
COL4A2P08572 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22■■□□□ 1.11
COL4A2P08572 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL4A2P08572 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL4A2P08572 AC068338.2-201ENST00000563278 1430 ntBASIC22■■□□□ 1.11
COL4A2P08572 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
COL4A2P08572 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL4A2P08572 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
COL4A2P08572 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
COL4A2P08572 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22■■□□□ 1.11
COL4A2P08572 AC079089.2-201ENST00000531211 1277 ntBASIC22■■□□□ 1.11
COL4A2P08572 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.99■■□□□ 1.11
COL4A2P08572 AP004607.7-201ENST00000527152 1677 ntBASIC21.99■■□□□ 1.11
COL4A2P08572 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
COL4A2P08572 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL4A2P08572 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
COL4A2P08572 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.99■■□□□ 1.11
COL4A2P08572 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL4A2P08572 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.98■■□□□ 1.11
COL4A2P08572 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.98■■□□□ 1.11
COL4A2P08572 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 AC093827.2-201ENST00000512654 315 ntBASIC21.98■■□□□ 1.11
COL4A2P08572 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.98■■□□□ 1.11
COL4A2P08572 AC105036.2-201ENST00000569468 176 ntBASIC21.98■■□□□ 1.11
COL4A2P08572 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
COL4A2P08572 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
COL4A2P08572 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL4A2P08572 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
COL4A2P08572 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
COL4A2P08572 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.97■■□□□ 1.11
COL4A2P08572 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.97■■□□□ 1.11
COL4A2P08572 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.97■■□□□ 1.11
COL4A2P08572 AL034346.1-201ENST00000568244 1277 ntBASIC21.97■■□□□ 1.11
COL4A2P08572 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.97■■□□□ 1.11
COL4A2P08572 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL4A2P08572 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.97■■□□□ 1.11
COL4A2P08572 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL4A2P08572 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.97■■□□□ 1.11
COL4A2P08572 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL4A2P08572 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL4A2P08572 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.97■■□□□ 1.11
COL4A2P08572 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.97■■□□□ 1.11
COL4A2P08572 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.97■■□□□ 1.11
COL4A2P08572 AC083880.1-201ENST00000608266 535 ntBASIC21.97■■□□□ 1.11
COL4A2P08572 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL4A2P08572 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
COL4A2P08572 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL4A2P08572 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL4A2P08572 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL4A2P08572 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL4A2P08572 SLC7A5P1-201ENST00000568957 537 ntBASIC21.96■■□□□ 1.11
COL4A2P08572 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.96■■□□□ 1.11
COL4A2P08572 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.96■■□□□ 1.11
COL4A2P08572 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.96■■□□□ 1.11
COL4A2P08572 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.96■■□□□ 1.11
COL4A2P08572 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
COL4A2P08572 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A2P08572 AC133041.1-202ENST00000642053 222 ntBASIC21.95■■□□□ 1.1
COL4A2P08572 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
COL4A2P08572 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A2P08572 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL4A2P08572 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.94■■□□□ 1.1
COL4A2P08572 AC008687.6-201ENST00000596318 630 ntBASIC21.94■■□□□ 1.1
COL4A2P08572 ITM2C-210ENST00000620962 501 ntBASIC21.94■■□□□ 1.1
COL4A2P08572 ANOS2P-203ENST00000472227 1816 ntBASIC21.94■■□□□ 1.1
COL4A2P08572 MKRN4P-201ENST00000444706 1521 ntBASIC21.94■■□□□ 1.1
COL4A2P08572 POU5F1P3-201ENST00000428824 1078 ntBASIC21.94■■□□□ 1.1
COL4A2P08572 AC098590.1-201ENST00000468126 897 ntBASIC21.94■■□□□ 1.1
COL4A2P08572 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL4A2P08572 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.94■■□□□ 1.1
COL4A2P08572 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.94■■□□□ 1.1
COL4A2P08572 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
COL4A2P08572 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A2P08572 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A2P08572 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
COL4A2P08572 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
COL4A2P08572 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.93■■□□□ 1.1
COL4A2P08572 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A2P08572 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL4A2P08572 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.92■■□□□ 1.1
COL4A2P08572 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms