Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FP325331.1-202ENST00000623531 1380 ntBASIC20.26■□□□□ 0.83
MT-ND1P03886 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MT-ND1P03886 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.26■□□□□ 0.83
MT-ND1P03886 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MT-ND1P03886 AC009086.3-201ENST00000623486 1008 ntBASIC20.26■□□□□ 0.83
MT-ND1P03886 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.26■□□□□ 0.83
MT-ND1P03886 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND1P03886 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.26■□□□□ 0.83
MT-ND1P03886 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.26■□□□□ 0.83
MT-ND1P03886 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MT-ND1P03886 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND1P03886 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND1P03886 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND1P03886 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND1P03886 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.25■□□□□ 0.83
MT-ND1P03886 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MT-ND1P03886 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.25■□□□□ 0.83
MT-ND1P03886 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.25■□□□□ 0.83
MT-ND1P03886 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND1P03886 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.25■□□□□ 0.83
MT-ND1P03886 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.25■□□□□ 0.83
MT-ND1P03886 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND1P03886 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND1P03886 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND1P03886 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND1P03886 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND1P03886 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.24■□□□□ 0.83
MT-ND1P03886 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MT-ND1P03886 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.24■□□□□ 0.83
MT-ND1P03886 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.24■□□□□ 0.83
MT-ND1P03886 Z92544.1-202ENST00000571933 1220 ntBASIC20.24■□□□□ 0.83
MT-ND1P03886 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
MT-ND1P03886 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.24■□□□□ 0.83
MT-ND1P03886 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND1P03886 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND1P03886 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.24■□□□□ 0.83
MT-ND1P03886 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.24■□□□□ 0.83
MT-ND1P03886 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND1P03886 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND1P03886 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.23■□□□□ 0.83
MT-ND1P03886 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.23■□□□□ 0.83
MT-ND1P03886 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.23■□□□□ 0.83
MT-ND1P03886 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MT-ND1P03886 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND1P03886 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND1P03886 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.23■□□□□ 0.83
MT-ND1P03886 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND1P03886 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND1P03886 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.23■□□□□ 0.83
MT-ND1P03886 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND1P03886 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND1P03886 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.23■□□□□ 0.83
MT-ND1P03886 AC092028.1-203ENST00000608262 953 ntBASIC20.23■□□□□ 0.83
MT-ND1P03886 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.23■□□□□ 0.83
MT-ND1P03886 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
MT-ND1P03886 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND1P03886 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND1P03886 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.23■□□□□ 0.83
MT-ND1P03886 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND1P03886 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND1P03886 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND1P03886 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.22■□□□□ 0.83
MT-ND1P03886 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND1P03886 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND1P03886 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MT-ND1P03886 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND1P03886 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.22■□□□□ 0.83
MT-ND1P03886 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MT-ND1P03886 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.22■□□□□ 0.83
MT-ND1P03886 KRT125P-201ENST00000546827 989 ntBASIC20.22■□□□□ 0.83
MT-ND1P03886 CA15P2-201ENST00000611168 834 ntBASIC20.22■□□□□ 0.83
MT-ND1P03886 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.22■□□□□ 0.83
MT-ND1P03886 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND1P03886 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.22■□□□□ 0.83
MT-ND1P03886 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
MT-ND1P03886 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
MT-ND1P03886 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND1P03886 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.22■□□□□ 0.83
MT-ND1P03886 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND1P03886 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-ND1P03886 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND1P03886 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.21■□□□□ 0.83
MT-ND1P03886 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
MT-ND1P03886 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.21■□□□□ 0.83
MT-ND1P03886 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND1P03886 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND1P03886 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-ND1P03886 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND1P03886 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-ND1P03886 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms