Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.61■■□□□ 1.37
TIMP1P01033 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.61■■□□□ 1.37
TIMP1P01033 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TIMP1P01033 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TIMP1P01033 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TIMP1P01033 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TIMP1P01033 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.6■■□□□ 1.37
TIMP1P01033 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
TIMP1P01033 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TIMP1P01033 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TIMP1P01033 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TIMP1P01033 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.6■■□□□ 1.37
TIMP1P01033 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.6■■□□□ 1.37
TIMP1P01033 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TIMP1P01033 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TIMP1P01033 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TIMP1P01033 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TIMP1P01033 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TIMP1P01033 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TIMP1P01033 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TIMP1P01033 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.59■■□□□ 1.37
TIMP1P01033 ESRRAP1-201ENST00000400596 1257 ntBASIC23.59■■□□□ 1.37
TIMP1P01033 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.59■■□□□ 1.37
TIMP1P01033 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TIMP1P01033 AC093787.1-201ENST00000450396 207 ntBASIC23.59■■□□□ 1.37
TIMP1P01033 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TIMP1P01033 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.59■■□□□ 1.37
TIMP1P01033 AC008694.1-202ENST00000636953 945 ntBASIC23.59■■□□□ 1.37
TIMP1P01033 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TIMP1P01033 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TIMP1P01033 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.59■■□□□ 1.37
TIMP1P01033 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.59■■□□□ 1.37
TIMP1P01033 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
TIMP1P01033 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TIMP1P01033 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TIMP1P01033 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TIMP1P01033 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TIMP1P01033 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.58■■□□□ 1.37
TIMP1P01033 AC083880.1-201ENST00000608266 535 ntBASIC23.58■■□□□ 1.37
TIMP1P01033 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TIMP1P01033 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TIMP1P01033 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
TIMP1P01033 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
TIMP1P01033 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TIMP1P01033 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
TIMP1P01033 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TIMP1P01033 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.57■■□□□ 1.36
TIMP1P01033 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.57■■□□□ 1.36
TIMP1P01033 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.57■■□□□ 1.36
TIMP1P01033 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.57■■□□□ 1.36
TIMP1P01033 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.57■■□□□ 1.36
TIMP1P01033 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TIMP1P01033 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.57■■□□□ 1.36
TIMP1P01033 AC069236.1-201ENST00000604339 616 ntBASIC23.57■■□□□ 1.36
TIMP1P01033 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.57■■□□□ 1.36
TIMP1P01033 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.57■■□□□ 1.36
TIMP1P01033 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.57■■□□□ 1.36
TIMP1P01033 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TIMP1P01033 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TIMP1P01033 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.56■■□□□ 1.36
TIMP1P01033 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TIMP1P01033 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
TIMP1P01033 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TIMP1P01033 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
TIMP1P01033 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.56■■□□□ 1.36
TIMP1P01033 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.56■■□□□ 1.36
TIMP1P01033 AC016405.3-201ENST00000607710 860 ntBASIC23.56■■□□□ 1.36
TIMP1P01033 MYC-209ENST00000641252 345 ntBASIC23.56■■□□□ 1.36
TIMP1P01033 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TIMP1P01033 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
TIMP1P01033 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.55■■□□□ 1.36
TIMP1P01033 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.55■■□□□ 1.36
TIMP1P01033 BX276092.2-201ENST00000417668 665 ntBASIC23.55■■□□□ 1.36
TIMP1P01033 AL596275.1-201ENST00000423464 877 ntBASIC23.55■■□□□ 1.36
TIMP1P01033 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.55■■□□□ 1.36
TIMP1P01033 AC097658.1-201ENST00000475555 843 ntBASIC23.55■■□□□ 1.36
TIMP1P01033 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.55■■□□□ 1.36
TIMP1P01033 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TIMP1P01033 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TIMP1P01033 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
TIMP1P01033 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TIMP1P01033 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TIMP1P01033 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
TIMP1P01033 AL139125.2-201ENST00000623134 1869 ntBASIC23.54■■□□□ 1.36
TIMP1P01033 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TIMP1P01033 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.54■■□□□ 1.36
TIMP1P01033 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TIMP1P01033 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.54■■□□□ 1.36
TIMP1P01033 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.54■■□□□ 1.36
TIMP1P01033 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.54■■□□□ 1.36
TIMP1P01033 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
TIMP1P01033 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
TIMP1P01033 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.53■■□□□ 1.36
TIMP1P01033 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.53■■□□□ 1.36
TIMP1P01033 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TIMP1P01033 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.53■■□□□ 1.36
TIMP1P01033 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.53■■□□□ 1.36
TIMP1P01033 AL158047.1-201ENST00000445918 881 ntBASIC23.53■■□□□ 1.36
TIMP1P01033 AC079089.2-201ENST00000531211 1277 ntBASIC23.53■■□□□ 1.36
TIMP1P01033 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms