Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN1O95832 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN1O95832 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN1O95832 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN1O95832 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.22■□□□□ 0.67
CLDN1O95832 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLDN1O95832 AC104187.1-201ENST00000607510 612 ntBASIC19.22■□□□□ 0.67
CLDN1O95832 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN1O95832 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN1O95832 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN1O95832 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CLDN1O95832 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN1O95832 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN1O95832 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN1O95832 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN1O95832 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN1O95832 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN1O95832 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN1O95832 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN1O95832 AP006294.2-201ENST00000641667 209 ntBASIC19.21■□□□□ 0.67
CLDN1O95832 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDN1O95832 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN1O95832 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN1O95832 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN1O95832 LINC01529-204ENST00000636474 1715 ntBASIC19.2■□□□□ 0.66
CLDN1O95832 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLDN1O95832 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN1O95832 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN1O95832 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.2■□□□□ 0.66
CLDN1O95832 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN1O95832 AL596275.1-201ENST00000423464 877 ntBASIC19.2■□□□□ 0.66
CLDN1O95832 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CLDN1O95832 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN1O95832 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN1O95832 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN1O95832 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN1O95832 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN1O95832 DUSP5P2-201ENST00000426873 1033 ntBASIC19.19■□□□□ 0.66
CLDN1O95832 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN1O95832 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN1O95832 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN1O95832 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CLDN1O95832 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN1O95832 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN1O95832 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLDN1O95832 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN1O95832 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN1O95832 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLDN1O95832 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CLDN1O95832 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN1O95832 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN1O95832 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CLDN1O95832 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN1O95832 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN1O95832 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN1O95832 SLC7A5P1-201ENST00000568957 537 ntBASIC19.18■□□□□ 0.66
CLDN1O95832 AC133552.2-202ENST00000575694 574 ntBASIC19.18■□□□□ 0.66
CLDN1O95832 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN1O95832 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN1O95832 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN1O95832 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN1O95832 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN1O95832 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN1O95832 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN1O95832 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN1O95832 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN1O95832 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN1O95832 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN1O95832 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN1O95832 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLDN1O95832 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN1O95832 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN1O95832 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.17■□□□□ 0.66
CLDN1O95832 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN1O95832 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN1O95832 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN1O95832 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN1O95832 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN1O95832 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN1O95832 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN1O95832 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN1O95832 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLDN1O95832 AC144652.1-201ENST00000609974 1624 ntBASIC19.16■□□□□ 0.66
CLDN1O95832 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN1O95832 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN1O95832 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN1O95832 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN1O95832 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLDN1O95832 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN1O95832 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN1O95832 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN1O95832 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN1O95832 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN1O95832 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN1O95832 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN1O95832 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN1O95832 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN1O95832 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN1O95832 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN1O95832 CNN2P6-201ENST00000439038 900 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms