Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDH8O95206 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH8O95206 LINC00526-201ENST00000581067 1875 ntBASIC21.53■■□□□ 1.04
PCDH8O95206 DUSP8P5-201ENST00000422884 1815 ntBASIC21.52■■□□□ 1.04
PCDH8O95206 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PCDH8O95206 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH8O95206 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH8O95206 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH8O95206 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.52■■□□□ 1.04
PCDH8O95206 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.52■■□□□ 1.04
PCDH8O95206 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH8O95206 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH8O95206 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH8O95206 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDH8O95206 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH8O95206 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PCDH8O95206 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH8O95206 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH8O95206 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH8O95206 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDH8O95206 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.51■■□□□ 1.03
PCDH8O95206 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH8O95206 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH8O95206 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH8O95206 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.51■■□□□ 1.03
PCDH8O95206 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PCDH8O95206 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH8O95206 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH8O95206 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH8O95206 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDH8O95206 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDH8O95206 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH8O95206 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH8O95206 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH8O95206 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 AC087742.1-201ENST00000575880 1738 ntBASIC21.5■■□□□ 1.03
PCDH8O95206 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PCDH8O95206 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH8O95206 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH8O95206 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.5■■□□□ 1.03
PCDH8O95206 AC006015.1-201ENST00000429970 570 ntBASIC21.5■■□□□ 1.03
PCDH8O95206 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH8O95206 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH8O95206 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH8O95206 KRT87P-202ENST00000534226 1464 ntBASIC21.5■■□□□ 1.03
PCDH8O95206 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
PCDH8O95206 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH8O95206 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH8O95206 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH8O95206 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH8O95206 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH8O95206 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH8O95206 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH8O95206 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PCDH8O95206 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PCDH8O95206 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH8O95206 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH8O95206 ESRRAP2-201ENST00000418437 1549 ntBASIC21.49■■□□□ 1.03
PCDH8O95206 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH8O95206 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH8O95206 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
PCDH8O95206 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH8O95206 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
PCDH8O95206 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH8O95206 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDH8O95206 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PCDH8O95206 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH8O95206 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCDH8O95206 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH8O95206 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH8O95206 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH8O95206 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH8O95206 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH8O95206 AL034346.1-201ENST00000568244 1277 ntBASIC21.47■■□□□ 1.03
PCDH8O95206 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH8O95206 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH8O95206 AC104187.1-201ENST00000607510 612 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms