Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.69■■□□□ 1.22
RTN3O95197 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RTN3O95197 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
RTN3O95197 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN3O95197 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.68■■□□□ 1.22
RTN3O95197 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTN3O95197 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTN3O95197 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN3O95197 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.68■■□□□ 1.22
RTN3O95197 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.68■■□□□ 1.22
RTN3O95197 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.68■■□□□ 1.22
RTN3O95197 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
RTN3O95197 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN3O95197 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTN3O95197 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.67■■□□□ 1.22
RTN3O95197 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.67■■□□□ 1.22
RTN3O95197 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN3O95197 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.67■■□□□ 1.22
RTN3O95197 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.67■■□□□ 1.22
RTN3O95197 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RTN3O95197 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RTN3O95197 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RTN3O95197 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN3O95197 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
RTN3O95197 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
RTN3O95197 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
RTN3O95197 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.67■■□□□ 1.22
RTN3O95197 AC005224.4-201ENST00000583262 1652 ntBASIC22.67■■□□□ 1.22
RTN3O95197 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTN3O95197 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.66■■□□□ 1.22
RTN3O95197 LINC00526-201ENST00000581067 1875 ntBASIC22.66■■□□□ 1.22
RTN3O95197 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTN3O95197 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.66■■□□□ 1.22
RTN3O95197 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTN3O95197 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
RTN3O95197 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.66■■□□□ 1.22
RTN3O95197 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.66■■□□□ 1.22
RTN3O95197 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.66■■□□□ 1.22
RTN3O95197 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTN3O95197 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.66■■□□□ 1.22
RTN3O95197 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTN3O95197 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTN3O95197 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTN3O95197 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTN3O95197 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTN3O95197 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
RTN3O95197 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTN3O95197 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.65■■□□□ 1.22
RTN3O95197 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTN3O95197 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.65■■□□□ 1.22
RTN3O95197 AL034346.1-201ENST00000568244 1277 ntBASIC22.65■■□□□ 1.22
RTN3O95197 AC022517.1-201ENST00000592429 346 ntBASIC22.65■■□□□ 1.22
RTN3O95197 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.65■■□□□ 1.22
RTN3O95197 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTN3O95197 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RTN3O95197 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.65■■□□□ 1.22
RTN3O95197 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTN3O95197 AC137767.1-201ENST00000602918 1920 ntBASIC22.65■■□□□ 1.22
RTN3O95197 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RTN3O95197 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTN3O95197 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
RTN3O95197 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTN3O95197 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RTN3O95197 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTN3O95197 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTN3O95197 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RTN3O95197 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTN3O95197 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTN3O95197 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RTN3O95197 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.64■■□□□ 1.21
RTN3O95197 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
RTN3O95197 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.64■■□□□ 1.21
RTN3O95197 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RTN3O95197 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
RTN3O95197 AP004607.7-201ENST00000527152 1677 ntBASIC22.64■■□□□ 1.21
RTN3O95197 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTN3O95197 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTN3O95197 ESRRAP2-201ENST00000418437 1549 ntBASIC22.63■■□□□ 1.21
RTN3O95197 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.63■■□□□ 1.21
RTN3O95197 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
RTN3O95197 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.63■■□□□ 1.21
RTN3O95197 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
RTN3O95197 AC079140.4-201ENST00000507448 529 ntBASIC22.63■■□□□ 1.21
RTN3O95197 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.63■■□□□ 1.21
RTN3O95197 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.63■■□□□ 1.21
RTN3O95197 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTN3O95197 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTN3O95197 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.62■■□□□ 1.21
RTN3O95197 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTN3O95197 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.62■■□□□ 1.21
RTN3O95197 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTN3O95197 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.62■■□□□ 1.21
RTN3O95197 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.62■■□□□ 1.21
RTN3O95197 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.62■■□□□ 1.21
RTN3O95197 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.62■■□□□ 1.21
RTN3O95197 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTN3O95197 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTN3O95197 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.62■■□□□ 1.21
RTN3O95197 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.61■■□□□ 1.21
RTN3O95197 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms