Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
GPC4O75487 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GPC4O75487 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GPC4O75487 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
GPC4O75487 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
GPC4O75487 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
GPC4O75487 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.51■■□□□ 1.03
GPC4O75487 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.51■■□□□ 1.03
GPC4O75487 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GPC4O75487 AC007375.3-201ENST00000600936 2314 ntBASIC21.51■■□□□ 1.03
GPC4O75487 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GPC4O75487 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
GPC4O75487 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
GPC4O75487 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.5■■□□□ 1.03
GPC4O75487 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GPC4O75487 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
GPC4O75487 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GPC4O75487 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.5■■□□□ 1.03
GPC4O75487 SLC47A1P1-202ENST00000449666 945 ntBASIC21.5■■□□□ 1.03
GPC4O75487 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.5■■□□□ 1.03
GPC4O75487 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GPC4O75487 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.5■■□□□ 1.03
GPC4O75487 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
GPC4O75487 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GPC4O75487 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GPC4O75487 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GPC4O75487 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GPC4O75487 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
GPC4O75487 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
GPC4O75487 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GPC4O75487 BX842568.3-201ENST00000418104 571 ntBASIC21.49■■□□□ 1.03
GPC4O75487 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GPC4O75487 AC133561.4-201ENST00000566112 224 ntBASIC21.49■■□□□ 1.03
GPC4O75487 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.49■■□□□ 1.03
GPC4O75487 C11orf96-202ENST00000528572 1834 ntBASIC21.49■■□□□ 1.03
GPC4O75487 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
GPC4O75487 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GPC4O75487 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GPC4O75487 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
GPC4O75487 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GPC4O75487 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GPC4O75487 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GPC4O75487 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.48■■□□□ 1.03
GPC4O75487 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
GPC4O75487 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
GPC4O75487 EDA-201ENST00000338901 1233 ntBASIC21.48■■□□□ 1.03
GPC4O75487 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.48■■□□□ 1.03
GPC4O75487 AC139530.1-201ENST00000575312 1977 ntBASIC21.48■■□□□ 1.03
GPC4O75487 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.48■■□□□ 1.03
GPC4O75487 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPC4O75487 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GPC4O75487 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GPC4O75487 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GPC4O75487 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.47■■□□□ 1.03
GPC4O75487 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.47■■□□□ 1.03
GPC4O75487 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
GPC4O75487 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.47■■□□□ 1.03
GPC4O75487 AL031432.3-201ENST00000607698 485 ntBASIC21.47■■□□□ 1.03
GPC4O75487 CA15P2-201ENST00000611168 834 ntBASIC21.47■■□□□ 1.03
GPC4O75487 AC068587.7-201ENST00000641602 218 ntBASIC21.47■■□□□ 1.03
GPC4O75487 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GPC4O75487 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GPC4O75487 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
GPC4O75487 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GPC4O75487 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GPC4O75487 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GPC4O75487 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GPC4O75487 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GPC4O75487 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
GPC4O75487 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.46■■□□□ 1.03
GPC4O75487 AC233992.3-201ENST00000607491 485 ntBASIC21.46■■□□□ 1.03
GPC4O75487 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.46■■□□□ 1.03
GPC4O75487 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.46■■□□□ 1.03
GPC4O75487 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GPC4O75487 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GPC4O75487 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GPC4O75487 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
GPC4O75487 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GPC4O75487 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
GPC4O75487 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
GPC4O75487 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.45■■□□□ 1.02
GPC4O75487 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.45■■□□□ 1.02
GPC4O75487 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GPC4O75487 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
GPC4O75487 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
GPC4O75487 AL355001.2-201ENST00000620617 1191 ntBASIC21.45■■□□□ 1.02
GPC4O75487 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GPC4O75487 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
GPC4O75487 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms