Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC9.77□□□□□ -0.84
USH2AO75445 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
USH2AO75445 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
USH2AO75445 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
USH2AO75445 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
USH2AO75445 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
USH2AO75445 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
USH2AO75445 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
USH2AO75445 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
USH2AO75445 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
USH2AO75445 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
USH2AO75445 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
USH2AO75445 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
USH2AO75445 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC9.77□□□□□ -0.85
USH2AO75445 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC9.77□□□□□ -0.85
USH2AO75445 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
USH2AO75445 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
USH2AO75445 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC9.77□□□□□ -0.85
USH2AO75445 POU5F1P4-201ENST00000413175 1085 ntBASIC9.77□□□□□ -0.85
USH2AO75445 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC9.77□□□□□ -0.85
USH2AO75445 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC9.77□□□□□ -0.85
USH2AO75445 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
USH2AO75445 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
USH2AO75445 KRT18P35-201ENST00000510488 1269 ntBASIC9.76□□□□□ -0.85
USH2AO75445 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
USH2AO75445 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
USH2AO75445 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC9.76□□□□□ -0.85
USH2AO75445 AC005224.4-201ENST00000583262 1652 ntBASIC9.76□□□□□ -0.85
USH2AO75445 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC9.76□□□□□ -0.85
USH2AO75445 AC026396.1-201ENST00000419388 421 ntBASIC9.76□□□□□ -0.85
USH2AO75445 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
USH2AO75445 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC9.76□□□□□ -0.85
USH2AO75445 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC9.76□□□□□ -0.85
USH2AO75445 ISCU-212ENST00000547005 795 ntTSL 3 BASIC9.76□□□□□ -0.85
USH2AO75445 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC9.76□□□□□ -0.85
USH2AO75445 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
USH2AO75445 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
USH2AO75445 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
USH2AO75445 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
USH2AO75445 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
USH2AO75445 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
USH2AO75445 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
USH2AO75445 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC9.76□□□□□ -0.85
USH2AO75445 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC9.76□□□□□ -0.85
USH2AO75445 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC9.76□□□□□ -0.85
USH2AO75445 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
USH2AO75445 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
USH2AO75445 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC9.75□□□□□ -0.85
USH2AO75445 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
USH2AO75445 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC9.75□□□□□ -0.85
USH2AO75445 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
USH2AO75445 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
USH2AO75445 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC9.75□□□□□ -0.85
USH2AO75445 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC9.75□□□□□ -0.85
USH2AO75445 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
USH2AO75445 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
USH2AO75445 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
USH2AO75445 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC9.75□□□□□ -0.85
USH2AO75445 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC9.75□□□□□ -0.85
USH2AO75445 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
USH2AO75445 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
USH2AO75445 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
USH2AO75445 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC9.75□□□□□ -0.85
USH2AO75445 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC9.75□□□□□ -0.85
USH2AO75445 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC9.75□□□□□ -0.85
USH2AO75445 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC9.75□□□□□ -0.85
USH2AO75445 AL353708.3-201ENST00000610272 989 ntBASIC9.75□□□□□ -0.85
USH2AO75445 ST7-205ENST00000393446 2114 ntTSL 5 BASIC9.75□□□□□ -0.85
USH2AO75445 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC9.75□□□□□ -0.85
USH2AO75445 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC9.75□□□□□ -0.85
USH2AO75445 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
USH2AO75445 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
USH2AO75445 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC9.75□□□□□ -0.85
USH2AO75445 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC9.75□□□□□ -0.85
USH2AO75445 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
USH2AO75445 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC9.74□□□□□ -0.85
USH2AO75445 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
USH2AO75445 AC010980.2-201ENST00000587099 1412 ntBASIC9.74□□□□□ -0.85
USH2AO75445 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC9.74□□□□□ -0.85
USH2AO75445 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
USH2AO75445 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC9.74□□□□□ -0.85
USH2AO75445 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC9.74□□□□□ -0.85
USH2AO75445 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC9.74□□□□□ -0.85
USH2AO75445 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
USH2AO75445 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
USH2AO75445 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC9.74□□□□□ -0.85
USH2AO75445 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC9.74□□□□□ -0.85
USH2AO75445 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC9.74□□□□□ -0.85
USH2AO75445 CD177P1-201ENST00000606252 935 ntBASIC9.74□□□□□ -0.85
USH2AO75445 OR10C1-204ENST00000622521 1039 ntBASIC9.74□□□□□ -0.85
USH2AO75445 AC092803.2-201ENST00000564287 1899 ntBASIC9.74□□□□□ -0.85
USH2AO75445 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC9.74□□□□□ -0.85
USH2AO75445 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC9.74□□□□□ -0.85
USH2AO75445 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC9.74□□□□□ -0.85
USH2AO75445 AL161729.1-201ENST00000604104 1402 ntBASIC9.74□□□□□ -0.85
USH2AO75445 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
USH2AO75445 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
USH2AO75445 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
USH2AO75445 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
USH2AO75445 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms