Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.61■□□□□ 0.89
CPNE3O75131 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE3O75131 DUSP8P5-201ENST00000422884 1815 ntBASIC20.61■□□□□ 0.89
CPNE3O75131 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.61■□□□□ 0.89
CPNE3O75131 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE3O75131 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE3O75131 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE3O75131 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE3O75131 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE3O75131 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE3O75131 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE3O75131 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CPNE3O75131 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE3O75131 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE3O75131 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE3O75131 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE3O75131 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.6■□□□□ 0.89
CPNE3O75131 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE3O75131 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE3O75131 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.6■□□□□ 0.89
CPNE3O75131 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE3O75131 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE3O75131 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE3O75131 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE3O75131 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE3O75131 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE3O75131 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE3O75131 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE3O75131 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CPNE3O75131 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE3O75131 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE3O75131 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE3O75131 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE3O75131 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE3O75131 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.59■□□□□ 0.89
CPNE3O75131 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CPNE3O75131 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE3O75131 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE3O75131 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE3O75131 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.59■□□□□ 0.89
CPNE3O75131 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE3O75131 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE3O75131 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CPNE3O75131 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.59■□□□□ 0.89
CPNE3O75131 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.59■□□□□ 0.89
CPNE3O75131 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.59■□□□□ 0.89
CPNE3O75131 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CPNE3O75131 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE3O75131 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE3O75131 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CPNE3O75131 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE3O75131 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE3O75131 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE3O75131 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE3O75131 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.58■□□□□ 0.89
CPNE3O75131 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.58■□□□□ 0.89
CPNE3O75131 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CPNE3O75131 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CPNE3O75131 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CPNE3O75131 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE3O75131 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE3O75131 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE3O75131 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.57■□□□□ 0.88
CPNE3O75131 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CPNE3O75131 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.57■□□□□ 0.88
CPNE3O75131 AC016769.1-201ENST00000409132 1010 ntBASIC20.57■□□□□ 0.88
CPNE3O75131 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.57■□□□□ 0.88
CPNE3O75131 KRT18P61-201ENST00000585825 1298 ntBASIC20.57■□□□□ 0.88
CPNE3O75131 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE3O75131 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE3O75131 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE3O75131 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE3O75131 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE3O75131 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE3O75131 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE3O75131 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE3O75131 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE3O75131 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE3O75131 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.56■□□□□ 0.88
CPNE3O75131 AC137761.2-201ENST00000561729 223 ntBASIC20.56■□□□□ 0.88
CPNE3O75131 AC145350.3-201ENST00000569033 163 ntBASIC20.56■□□□□ 0.88
CPNE3O75131 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.56■□□□□ 0.88
CPNE3O75131 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.56■□□□□ 0.88
CPNE3O75131 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.56■□□□□ 0.88
CPNE3O75131 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE3O75131 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPNE3O75131 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.56■□□□□ 0.88
CPNE3O75131 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE3O75131 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE3O75131 AP004607.4-201ENST00000530158 1459 ntBASIC20.56■□□□□ 0.88
CPNE3O75131 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE3O75131 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CPNE3O75131 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE3O75131 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE3O75131 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE3O75131 AC004854.2-201ENST00000608450 1441 ntBASIC20.55■□□□□ 0.88
CPNE3O75131 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE3O75131 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE3O75131 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CPNE3O75131 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms