Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.22■■□□□ 1.15
TSPAN3O60637 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.22■■□□□ 1.15
TSPAN3O60637 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TSPAN3O60637 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TSPAN3O60637 AC005224.4-201ENST00000583262 1652 ntBASIC22.22■■□□□ 1.15
TSPAN3O60637 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TSPAN3O60637 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.22■■□□□ 1.15
TSPAN3O60637 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TSPAN3O60637 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TSPAN3O60637 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.21■■□□□ 1.15
TSPAN3O60637 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TSPAN3O60637 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.21■■□□□ 1.15
TSPAN3O60637 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.21■■□□□ 1.15
TSPAN3O60637 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TSPAN3O60637 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.21■■□□□ 1.15
TSPAN3O60637 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.21■■□□□ 1.15
TSPAN3O60637 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.21■■□□□ 1.15
TSPAN3O60637 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.21■■□□□ 1.15
TSPAN3O60637 AC009237.3-201ENST00000393279 1427 ntBASIC22.21■■□□□ 1.15
TSPAN3O60637 AC004854.2-201ENST00000608450 1441 ntBASIC22.21■■□□□ 1.15
TSPAN3O60637 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
TSPAN3O60637 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
TSPAN3O60637 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TSPAN3O60637 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TSPAN3O60637 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TSPAN3O60637 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.2■■□□□ 1.14
TSPAN3O60637 AC079140.4-201ENST00000507448 529 ntBASIC22.2■■□□□ 1.14
TSPAN3O60637 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TSPAN3O60637 AP004607.4-201ENST00000530158 1459 ntBASIC22.2■■□□□ 1.14
TSPAN3O60637 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TSPAN3O60637 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TSPAN3O60637 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TSPAN3O60637 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.2■■□□□ 1.14
TSPAN3O60637 AC139530.1-201ENST00000575312 1977 ntBASIC22.19■■□□□ 1.14
TSPAN3O60637 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TSPAN3O60637 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.19■■□□□ 1.14
TSPAN3O60637 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.19■■□□□ 1.14
TSPAN3O60637 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.19■■□□□ 1.14
TSPAN3O60637 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TSPAN3O60637 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.19■■□□□ 1.14
TSPAN3O60637 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TSPAN3O60637 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.19■■□□□ 1.14
TSPAN3O60637 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
TSPAN3O60637 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.19■■□□□ 1.14
TSPAN3O60637 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TSPAN3O60637 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TSPAN3O60637 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TSPAN3O60637 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TSPAN3O60637 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TSPAN3O60637 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TSPAN3O60637 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
TSPAN3O60637 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TSPAN3O60637 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TSPAN3O60637 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TSPAN3O60637 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TSPAN3O60637 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TSPAN3O60637 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TSPAN3O60637 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.17■■□□□ 1.14
TSPAN3O60637 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.17■■□□□ 1.14
TSPAN3O60637 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.17■■□□□ 1.14
TSPAN3O60637 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
TSPAN3O60637 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.17■■□□□ 1.14
TSPAN3O60637 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.17■■□□□ 1.14
TSPAN3O60637 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
TSPAN3O60637 AC092437.1-201ENST00000624794 1048 ntBASIC22.17■■□□□ 1.14
TSPAN3O60637 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TSPAN3O60637 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TSPAN3O60637 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TSPAN3O60637 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TSPAN3O60637 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TSPAN3O60637 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.16■■□□□ 1.14
TSPAN3O60637 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TSPAN3O60637 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.16■■□□□ 1.14
TSPAN3O60637 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.16■■□□□ 1.14
TSPAN3O60637 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.16■■□□□ 1.14
TSPAN3O60637 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.16■■□□□ 1.14
TSPAN3O60637 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.16■■□□□ 1.14
TSPAN3O60637 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TSPAN3O60637 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TSPAN3O60637 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TSPAN3O60637 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.16■■□□□ 1.14
TSPAN3O60637 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TSPAN3O60637 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.16■■□□□ 1.14
TSPAN3O60637 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TSPAN3O60637 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TSPAN3O60637 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
TSPAN3O60637 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.15■■□□□ 1.14
TSPAN3O60637 AC004911.1-201ENST00000416316 871 ntBASIC22.15■■□□□ 1.14
TSPAN3O60637 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TSPAN3O60637 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.15■■□□□ 1.14
TSPAN3O60637 AL137784.2-201ENST00000607332 1000 ntBASIC22.15■■□□□ 1.14
TSPAN3O60637 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.15■■□□□ 1.14
TSPAN3O60637 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TSPAN3O60637 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.15■■□□□ 1.14
TSPAN3O60637 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.15■■□□□ 1.14
TSPAN3O60637 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.14■■□□□ 1.14
TSPAN3O60637 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TSPAN3O60637 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TSPAN3O60637 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TSPAN3O60637 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms