Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPHS1O60500 AC006455.2-201ENST00000429931 906 ntBASIC21.01■□□□□ 0.95
NPHS1O60500 RARRES2P1-201ENST00000474487 481 ntBASIC21.01■□□□□ 0.95
NPHS1O60500 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPHS1O60500 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPHS1O60500 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPHS1O60500 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPHS1O60500 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPHS1O60500 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPHS1O60500 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPHS1O60500 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21■□□□□ 0.95
NPHS1O60500 UNC93B8-201ENST00000511903 705 ntBASIC21■□□□□ 0.95
NPHS1O60500 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21■□□□□ 0.95
NPHS1O60500 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21■□□□□ 0.95
NPHS1O60500 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPHS1O60500 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPHS1O60500 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NPHS1O60500 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NPHS1O60500 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21■□□□□ 0.95
NPHS1O60500 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPHS1O60500 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21■□□□□ 0.95
NPHS1O60500 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21■□□□□ 0.95
NPHS1O60500 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPHS1O60500 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPHS1O60500 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPHS1O60500 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPHS1O60500 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPHS1O60500 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPHS1O60500 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.99■□□□□ 0.95
NPHS1O60500 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPHS1O60500 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPHS1O60500 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPHS1O60500 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.99■□□□□ 0.95
NPHS1O60500 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.99■□□□□ 0.95
NPHS1O60500 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NPHS1O60500 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPHS1O60500 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPHS1O60500 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPHS1O60500 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.98■□□□□ 0.95
NPHS1O60500 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.98■□□□□ 0.95
NPHS1O60500 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.98■□□□□ 0.95
NPHS1O60500 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPHS1O60500 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.98■□□□□ 0.95
NPHS1O60500 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPHS1O60500 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPHS1O60500 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPHS1O60500 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
NPHS1O60500 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.98■□□□□ 0.95
NPHS1O60500 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NPHS1O60500 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPHS1O60500 AF106564.1-201ENST00000607058 2553 ntBASIC20.97■□□□□ 0.95
NPHS1O60500 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.97■□□□□ 0.95
NPHS1O60500 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPHS1O60500 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.97■□□□□ 0.95
NPHS1O60500 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.97■□□□□ 0.95
NPHS1O60500 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPHS1O60500 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.97■□□□□ 0.95
NPHS1O60500 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NPHS1O60500 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.97■□□□□ 0.95
NPHS1O60500 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.97■□□□□ 0.95
NPHS1O60500 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NPHS1O60500 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPHS1O60500 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
NPHS1O60500 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.96■□□□□ 0.95
NPHS1O60500 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.96■□□□□ 0.95
NPHS1O60500 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPHS1O60500 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
NPHS1O60500 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPHS1O60500 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.95■□□□□ 0.95
NPHS1O60500 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPHS1O60500 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.95■□□□□ 0.94
NPHS1O60500 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.95■□□□□ 0.94
NPHS1O60500 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.95■□□□□ 0.94
NPHS1O60500 OR2I1P-207ENST00000453522 948 ntBASIC20.95■□□□□ 0.94
NPHS1O60500 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.95■□□□□ 0.94
NPHS1O60500 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPHS1O60500 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.95■□□□□ 0.94
NPHS1O60500 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.95■□□□□ 0.94
NPHS1O60500 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPHS1O60500 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPHS1O60500 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPHS1O60500 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.95■□□□□ 0.94
NPHS1O60500 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPHS1O60500 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.94■□□□□ 0.94
NPHS1O60500 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NPHS1O60500 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPHS1O60500 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPHS1O60500 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.94■□□□□ 0.94
NPHS1O60500 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPHS1O60500 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPHS1O60500 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.94■□□□□ 0.94
NPHS1O60500 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NPHS1O60500 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.94■□□□□ 0.94
NPHS1O60500 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.94■□□□□ 0.94
NPHS1O60500 AC099791.2-201ENST00000605725 427 ntBASIC20.94■□□□□ 0.94
NPHS1O60500 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.94■□□□□ 0.94
NPHS1O60500 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.94■□□□□ 0.94
NPHS1O60500 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPHS1O60500 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.94■□□□□ 0.94
NPHS1O60500 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms