Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.65■□□□□ 0.9
LCMT2O60294 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.64■□□□□ 0.9
LCMT2O60294 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LCMT2O60294 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LCMT2O60294 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.64■□□□□ 0.9
LCMT2O60294 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
LCMT2O60294 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCMT2O60294 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.64■□□□□ 0.89
LCMT2O60294 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LCMT2O60294 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
LCMT2O60294 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.64■□□□□ 0.89
LCMT2O60294 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.64■□□□□ 0.89
LCMT2O60294 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.64■□□□□ 0.89
LCMT2O60294 AC012414.1-201ENST00000556676 535 ntBASIC20.64■□□□□ 0.89
LCMT2O60294 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.64■□□□□ 0.89
LCMT2O60294 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCMT2O60294 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCMT2O60294 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.64■□□□□ 0.89
LCMT2O60294 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LCMT2O60294 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.64■□□□□ 0.89
LCMT2O60294 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LCMT2O60294 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.64■□□□□ 0.89
LCMT2O60294 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCMT2O60294 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
LCMT2O60294 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.63■□□□□ 0.89
LCMT2O60294 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCMT2O60294 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCMT2O60294 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.63■□□□□ 0.89
LCMT2O60294 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCMT2O60294 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCMT2O60294 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.63■□□□□ 0.89
LCMT2O60294 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.63■□□□□ 0.89
LCMT2O60294 MIR6084-201ENST00000622012 110 ntBASIC20.63■□□□□ 0.89
LCMT2O60294 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCMT2O60294 AP004607.7-201ENST00000527152 1677 ntBASIC20.63■□□□□ 0.89
LCMT2O60294 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LCMT2O60294 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LCMT2O60294 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCMT2O60294 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCMT2O60294 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCMT2O60294 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCMT2O60294 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCMT2O60294 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCMT2O60294 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LCMT2O60294 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.62■□□□□ 0.89
LCMT2O60294 AL358852.1-201ENST00000623174 1268 ntBASIC20.62■□□□□ 0.89
LCMT2O60294 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCMT2O60294 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LCMT2O60294 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCMT2O60294 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.62■□□□□ 0.89
LCMT2O60294 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.62■□□□□ 0.89
LCMT2O60294 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCMT2O60294 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCMT2O60294 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCMT2O60294 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCMT2O60294 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCMT2O60294 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LCMT2O60294 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LCMT2O60294 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.61■□□□□ 0.89
LCMT2O60294 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCMT2O60294 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCMT2O60294 AL354811.1-201ENST00000610286 706 ntBASIC20.61■□□□□ 0.89
LCMT2O60294 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.61■□□□□ 0.89
LCMT2O60294 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.61■□□□□ 0.89
LCMT2O60294 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.61■□□□□ 0.89
LCMT2O60294 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LCMT2O60294 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCMT2O60294 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCMT2O60294 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCMT2O60294 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCMT2O60294 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCMT2O60294 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.6■□□□□ 0.89
LCMT2O60294 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LCMT2O60294 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
LCMT2O60294 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.6■□□□□ 0.89
LCMT2O60294 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.6■□□□□ 0.89
LCMT2O60294 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.6■□□□□ 0.89
LCMT2O60294 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.6■□□□□ 0.89
LCMT2O60294 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.6■□□□□ 0.89
LCMT2O60294 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.6■□□□□ 0.89
LCMT2O60294 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
LCMT2O60294 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
LCMT2O60294 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LCMT2O60294 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LCMT2O60294 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
LCMT2O60294 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LCMT2O60294 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCMT2O60294 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCMT2O60294 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.6■□□□□ 0.89
LCMT2O60294 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCMT2O60294 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.59■□□□□ 0.89
LCMT2O60294 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LCMT2O60294 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCMT2O60294 BX005040.4-201ENST00000637145 1518 ntBASIC20.59■□□□□ 0.89
LCMT2O60294 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCMT2O60294 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.59■□□□□ 0.89
LCMT2O60294 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCMT2O60294 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LCMT2O60294 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LCMT2O60294 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms