Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.45■■□□□ 1.025e-11■□□□□ 8.1
EIF3DO15371 ATP6V0B-206ENST00000472277 536 ntTSL 320.34■□□□□ 0.855e-11■□□□□ 8.1
EIF3DO15371 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.748e-7■□□□□ 8.1
EIF3DO15371 FNBP4-215ENST00000542975 577 ntTSL 419.13■□□□□ 0.658e-7■□□□□ 8.1
EIF3DO15371 ATP6V0B-202ENST00000461670 530 ntTSL 518.75■□□□□ 0.595e-11■□□□□ 8.1
EIF3DO15371 FNBP4-213ENST00000534003 2515 ntTSL 518.63■□□□□ 0.578e-7■□□□□ 8.1
EIF3DO15371 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.488e-7■□□□□ 8.1
EIF3DO15371 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.458e-7■□□□□ 8.1
EIF3DO15371 HMGA1-206ENST00000478214 716 ntTSL 1 (best)16.94■□□□□ 0.35e-11■□□□□ 8.1
EIF3DO15371 FNBP4-214ENST00000540172 582 ntTSL 316.04■□□□□ 0.168e-7■□□□□ 8.1
EIF3DO15371 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.92■□□□□ 0.145e-11■□□□□ 8.1
EIF3DO15371 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.128e-7■□□□□ 8.1
EIF3DO15371 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.098e-7■□□□□ 8.1
EIF3DO15371 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.065e-11■□□□□ 8.1
EIF3DO15371 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.07■□□□□ 08e-7■□□□□ 8.1
EIF3DO15371 ATP6V0B-209ENST00000496131 962 ntTSL 314.84□□□□□ -0.035e-11■□□□□ 8.1
EIF3DO15371 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.53□□□□□ -0.088e-7■□□□□ 8.1
EIF3DO15371 ATP6V0B-207ENST00000472505 411 ntTSL 514.26□□□□□ -0.135e-11■□□□□ 8.1
EIF3DO15371 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.198e-7■□□□□ 8.1
EIF3DO15371 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.48e-7■□□□□ 8.1
EIF3DO15371 COPG1-208ENST00000513965 730 ntTSL 212.04□□□□□ -0.488e-7■□□□□ 8.1
EIF3DO15371 PTP4A1-207ENST00000639568 532 ntTSL 511.3□□□□□ -0.65e-11■□□□□ 8.1
EIF3DO15371 COPG1-210ENST00000515725 3231 ntTSL 29.81□□□□□ -0.848e-7■□□□□ 8.1
EIF3DO15371 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.918e-7■□□□□ 8.1
EIF3DO15371 ELP1-203ENST00000495759 2840 ntTSL 1 (best)7.66□□□□□ -1.188e-7■□□□□ 8.1
EIF3DO15371 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.46□□□□□ -1.228e-7■□□□□ 8.1
EIF3DO15371 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.348e-7■□□□□ 8.1
EIF3DO15371 COPG1-202ENST00000504350 672 ntTSL 36.5□□□□□ -1.378e-7■□□□□ 8.1
EIF3DO15371 BIRC6-212ENST00000497023 578 ntTSL 42.51□□□□□ -2.018e-7■□□□□ 8.1
EIF3DO15371 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.055e-23■□□□□ 8
EIF3DO15371 ERBB2-211ENST00000582648 1013 ntTSL 519.55■□□□□ 0.721e-9■□□□□ 8
EIF3DO15371 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.19■□□□□ 0.661e-9■□□□□ 8
EIF3DO15371 ERBB2-212ENST00000582788 2004 ntTSL 518.77■□□□□ 0.61e-9■□□□□ 8
EIF3DO15371 ERBB2-222ENST00000584908 1316 ntTSL 1 (best)17.72■□□□□ 0.431e-9■□□□□ 8
EIF3DO15371 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.6□□□□□ -0.231e-9■□□□□ 8
EIF3DO15371 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC13.34□□□□□ -0.271e-9■□□□□ 8
EIF3DO15371 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC12.9□□□□□ -0.341e-9■□□□□ 8
EIF3DO15371 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC12.76□□□□□ -0.371e-9■□□□□ 8
EIF3DO15371 ERBB2-206ENST00000578373 4523 ntTSL 1 (best)12.68□□□□□ -0.381e-9■□□□□ 8
EIF3DO15371 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.41e-9■□□□□ 8
EIF3DO15371 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC11.14□□□□□ -0.631e-9■□□□□ 8
EIF3DO15371 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.234e-7■□□□□ 8
EIF3DO15371 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.144e-7■□□□□ 8
EIF3DO15371 IDH1-202ENST00000415282 942 ntTSL 218.69■□□□□ 0.584e-7■□□□□ 8
EIF3DO15371 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.11■□□□□ 0.174e-7■□□□□ 8
EIF3DO15371 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC12.48□□□□□ -0.414e-7■□□□□ 8
EIF3DO15371 IDH1-203ENST00000415913 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.554e-7■□□□□ 8
EIF3DO15371 GAS5-224ENST00000454068 688 ntTSL 5 BASIC10.89□□□□□ -0.674e-7■□□□□ 8
EIF3DO15371 GAS5-214ENST00000436656 822 ntTSL 310.29□□□□□ -0.764e-7■□□□□ 8
EIF3DO15371 GAS5-216ENST00000443799 897 ntTSL 510.29□□□□□ -0.764e-7■□□□□ 8
EIF3DO15371 GAS5-210ENST00000431268 1698 ntTSL 29.58□□□□□ -0.884e-7■□□□□ 8
EIF3DO15371 GAS5-219ENST00000449289 542 ntTSL 3 BASIC8.84□□□□□ -0.994e-7■□□□□ 8
EIF3DO15371 GAS5-220ENST00000449589 712 ntTSL 38.84□□□□□ -0.994e-7■□□□□ 8
EIF3DO15371 GAS5-226ENST00000455838 632 ntTSL 28.84□□□□□ -0.994e-7■□□□□ 8
EIF3DO15371 GAS5-203ENST00000416952 799 ntTSL 28.61□□□□□ -1.034e-7■□□□□ 8
EIF3DO15371 GAS5-227ENST00000456293 583 ntTSL 37.85□□□□□ -1.154e-7■□□□□ 8
EIF3DO15371 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.79□□□□□ -1.164e-7■□□□□ 8
EIF3DO15371 GAS5-228ENST00000456812 723 ntTSL 37.47□□□□□ -1.214e-7■□□□□ 8
EIF3DO15371 GAS5-206ENST00000422183 745 ntTSL 26.83□□□□□ -1.324e-7■□□□□ 8
EIF3DO15371 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.42□□□□□ -1.384e-7■□□□□ 8
EIF3DO15371 GAS5-201ENST00000412059 979 ntTSL 55.99□□□□□ -1.454e-7■□□□□ 8
EIF3DO15371 GAS5-205ENST00000422008 497 ntTSL 35.3□□□□□ -1.564e-7■□□□□ 8
EIF3DO15371 GAS5-215ENST00000442067 1114 ntTSL 25.08□□□□□ -1.64e-7■□□□□ 8
EIF3DO15371 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.47□□□□□ -1.694e-7■□□□□ 8
EIF3DO15371 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.43□□□□□ -1.74e-7■□□□□ 8
EIF3DO15371 GAS5-213ENST00000436285 772 ntTSL 23.93□□□□□ -1.784e-7■□□□□ 8
EIF3DO15371 GAS5-204ENST00000421068 1060 ntTSL 23.84□□□□□ -1.794e-7■□□□□ 8
EIF3DO15371 GAS5-229ENST00000458220 469 ntTSL 23.8□□□□□ -1.84e-7■□□□□ 8
EIF3DO15371 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.61□□□□□ -1.994e-7■□□□□ 8
Retrieved 69 of 4,069 protein–RNA pairs in 28.9 ms