Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM38O00635 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM38O00635 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TRIM38O00635 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM38O00635 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.64■■□□□ 1.05
TRIM38O00635 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.64■■□□□ 1.05
TRIM38O00635 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM38O00635 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM38O00635 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TRIM38O00635 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TRIM38O00635 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM38O00635 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TRIM38O00635 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.63■■□□□ 1.05
TRIM38O00635 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
TRIM38O00635 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM38O00635 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM38O00635 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM38O00635 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM38O00635 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRIM38O00635 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TRIM38O00635 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.63■■□□□ 1.05
TRIM38O00635 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM38O00635 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM38O00635 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.63■■□□□ 1.05
TRIM38O00635 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM38O00635 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM38O00635 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM38O00635 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM38O00635 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM38O00635 AC007375.3-201ENST00000600936 2314 ntBASIC21.62■■□□□ 1.05
TRIM38O00635 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM38O00635 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM38O00635 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.62■■□□□ 1.05
TRIM38O00635 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM38O00635 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM38O00635 AC105233.4-201ENST00000642045 216 ntBASIC21.62■■□□□ 1.05
TRIM38O00635 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TRIM38O00635 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM38O00635 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM38O00635 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM38O00635 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM38O00635 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM38O00635 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM38O00635 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM38O00635 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM38O00635 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM38O00635 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRIM38O00635 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM38O00635 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM38O00635 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRIM38O00635 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRIM38O00635 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM38O00635 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.61■■□□□ 1.05
TRIM38O00635 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM38O00635 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM38O00635 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM38O00635 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM38O00635 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM38O00635 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM38O00635 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM38O00635 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM38O00635 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRIM38O00635 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
TRIM38O00635 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM38O00635 AC242852.2-201ENST00000615738 1807 ntBASIC21.6■■□□□ 1.05
TRIM38O00635 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM38O00635 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM38O00635 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM38O00635 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM38O00635 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TRIM38O00635 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM38O00635 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM38O00635 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM38O00635 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM38O00635 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
TRIM38O00635 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM38O00635 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM38O00635 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM38O00635 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM38O00635 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.59■■□□□ 1.05
TRIM38O00635 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM38O00635 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM38O00635 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TRIM38O00635 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TRIM38O00635 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM38O00635 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.58■■□□□ 1.05
TRIM38O00635 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM38O00635 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM38O00635 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TRIM38O00635 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TRIM38O00635 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM38O00635 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM38O00635 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.58■■□□□ 1.05
TRIM38O00635 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.58■■□□□ 1.05
TRIM38O00635 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM38O00635 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM38O00635 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM38O00635 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TRIM38O00635 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.58■■□□□ 1.04
TRIM38O00635 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms