Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
AP3B1O00203 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
AP3B1O00203 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3B1O00203 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
AP3B1O00203 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3B1O00203 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3B1O00203 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3B1O00203 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
AP3B1O00203 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3B1O00203 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.77■■□□□ 1.08
AP3B1O00203 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.77■■□□□ 1.08
AP3B1O00203 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.77■■□□□ 1.08
AP3B1O00203 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP3B1O00203 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
AP3B1O00203 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.76■■□□□ 1.07
AP3B1O00203 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP3B1O00203 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP3B1O00203 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP3B1O00203 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
AP3B1O00203 AL136116.3-201ENST00000402907 1138 ntBASIC21.76■■□□□ 1.07
AP3B1O00203 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
AP3B1O00203 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.76■■□□□ 1.07
AP3B1O00203 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.76■■□□□ 1.07
AP3B1O00203 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.76■■□□□ 1.07
AP3B1O00203 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.76■■□□□ 1.07
AP3B1O00203 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP3B1O00203 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.75■■□□□ 1.07
AP3B1O00203 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
AP3B1O00203 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
AP3B1O00203 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
AP3B1O00203 AC104564.3-201ENST00000582367 638 ntBASIC21.75■■□□□ 1.07
AP3B1O00203 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.75■■□□□ 1.07
AP3B1O00203 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
AP3B1O00203 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
AP3B1O00203 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.75■■□□□ 1.07
AP3B1O00203 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
AP3B1O00203 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.75■■□□□ 1.07
AP3B1O00203 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP3B1O00203 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.74■■□□□ 1.07
AP3B1O00203 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP3B1O00203 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP3B1O00203 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP3B1O00203 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
AP3B1O00203 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP3B1O00203 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.74■■□□□ 1.07
AP3B1O00203 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AP3B1O00203 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AP3B1O00203 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.74■■□□□ 1.07
AP3B1O00203 SLC47A1P1-202ENST00000449666 945 ntBASIC21.74■■□□□ 1.07
AP3B1O00203 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.74■■□□□ 1.07
AP3B1O00203 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.74■■□□□ 1.07
AP3B1O00203 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AP3B1O00203 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.73■■□□□ 1.07
AP3B1O00203 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3B1O00203 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AP3B1O00203 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3B1O00203 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3B1O00203 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.73■■□□□ 1.07
AP3B1O00203 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
AP3B1O00203 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AP3B1O00203 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
AP3B1O00203 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.73■■□□□ 1.07
AP3B1O00203 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3B1O00203 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP3B1O00203 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP3B1O00203 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AP3B1O00203 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.72■■□□□ 1.07
AP3B1O00203 BX842568.3-201ENST00000418104 571 ntBASIC21.72■■□□□ 1.07
AP3B1O00203 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.72■■□□□ 1.07
AP3B1O00203 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP3B1O00203 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AP3B1O00203 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AP3B1O00203 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
AP3B1O00203 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
AP3B1O00203 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP3B1O00203 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP3B1O00203 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP3B1O00203 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP3B1O00203 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
AP3B1O00203 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
AP3B1O00203 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP3B1O00203 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
AP3B1O00203 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
AP3B1O00203 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.71■■□□□ 1.07
AP3B1O00203 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.71■■□□□ 1.07
AP3B1O00203 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP3B1O00203 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP3B1O00203 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP3B1O00203 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP3B1O00203 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP3B1O00203 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP3B1O00203 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AP3B1O00203 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.7■■□□□ 1.06
AP3B1O00203 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
AP3B1O00203 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.7■■□□□ 1.06
AP3B1O00203 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AP3B1O00203 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.7■■□□□ 1.06
AP3B1O00203 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.7■■□□□ 1.06
AP3B1O00203 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.7■■□□□ 1.06
AP3B1O00203 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms