Protein–RNA interactions for Protein: A8MTJ6

FOXI3, Forkhead box protein I3, humanhuman

Predicted RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXI3A8MTJ6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 MIR6724-1-201ENST00000616420 92 ntBASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 MIR6724-2-201ENST00000616483 92 ntBASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 MIR6724-4-201ENST00000617390 92 ntBASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 MIR6724-3-201ENST00000622482 92 ntBASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXI3A8MTJ6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 OR7E47P-201ENST00000546390 1422 ntBASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
FOXI3A8MTJ6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 UNC93B8-201ENST00000511903 705 ntBASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 pRNA.6-201ENST00000610482 90 ntBASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 pRNA.5-201ENST00000612139 90 ntBASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 pRNA.11-201ENST00000618423 90 ntBASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 pRNA.13-201ENST00000619112 90 ntBASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXI3A8MTJ6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FOXI3A8MTJ6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.14■□□□□ 0.5
FOXI3A8MTJ6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 AC009299.2-201ENST00000482477 511 ntBASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 AC104564.3-201ENST00000582367 638 ntBASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXI3A8MTJ6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 RARRES2P1-201ENST00000474487 481 ntBASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXI3A8MTJ6 SLC25A24-204ENST00000569674 2357 ntBASIC18.12■□□□□ 0.49
FOXI3A8MTJ6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXI3A8MTJ6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXI3A8MTJ6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXI3A8MTJ6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXI3A8MTJ6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms