Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 MKRN4P-201ENST00000444706 1521 ntBASIC21.15■□□□□ 0.98
C4orf47A7E2U8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4orf47A7E2U8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.14■□□□□ 0.98
C4orf47A7E2U8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.14■□□□□ 0.97
C4orf47A7E2U8 GCSHP5-201ENST00000443090 522 ntBASIC21.14■□□□□ 0.97
C4orf47A7E2U8 RARRES2P4-201ENST00000514074 484 ntBASIC21.14■□□□□ 0.97
C4orf47A7E2U8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
C4orf47A7E2U8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.14■□□□□ 0.97
C4orf47A7E2U8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.14■□□□□ 0.97
C4orf47A7E2U8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
C4orf47A7E2U8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
C4orf47A7E2U8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.14■□□□□ 0.97
C4orf47A7E2U8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 LINC01124-201ENST00000409786 2117 ntBASIC21.13■□□□□ 0.97
C4orf47A7E2U8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 AL596275.1-201ENST00000423464 877 ntBASIC21.13■□□□□ 0.97
C4orf47A7E2U8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.13■□□□□ 0.97
C4orf47A7E2U8 AC079630.1-202ENST00000618127 1840 ntBASIC21.13■□□□□ 0.97
C4orf47A7E2U8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 AL158047.1-201ENST00000445918 881 ntBASIC21.12■□□□□ 0.97
C4orf47A7E2U8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
C4orf47A7E2U8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 ESRRAP1-201ENST00000400596 1257 ntBASIC21.11■□□□□ 0.97
C4orf47A7E2U8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 AC013268.1-206ENST00000638368 961 ntBASIC21.11■□□□□ 0.97
C4orf47A7E2U8 AC112229.1-201ENST00000639295 961 ntBASIC21.11■□□□□ 0.97
C4orf47A7E2U8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C4orf47A7E2U8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 RPS2P4-201ENST00000476944 856 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms