Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 KRT16P3-201ENST00000439127 1283 ntBASIC21.47■■□□□ 1.03
CCDC189A1A4V9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC189A1A4V9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC189A1A4V9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC189A1A4V9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC189A1A4V9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC189A1A4V9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC189A1A4V9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC189A1A4V9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC189A1A4V9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC189A1A4V9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC189A1A4V9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.03
CCDC189A1A4V9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
CCDC189A1A4V9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC189A1A4V9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC189A1A4V9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CCDC189A1A4V9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC189A1A4V9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC189A1A4V9 AL356740.2-201ENST00000601559 647 ntBASIC21.45■■□□□ 1.02
CCDC189A1A4V9 AL035685.1-201ENST00000636663 812 ntBASIC21.45■■□□□ 1.02
CCDC189A1A4V9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC189A1A4V9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC189A1A4V9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.45■■□□□ 1.02
CCDC189A1A4V9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC189A1A4V9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 MIR3621-201ENST00000580529 85 ntBASIC21.43■■□□□ 1.02
CCDC189A1A4V9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
CCDC189A1A4V9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC189A1A4V9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC189A1A4V9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC189A1A4V9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC189A1A4V9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC189A1A4V9 AC092171.4-201ENST00000609130 632 ntBASIC21.42■■□□□ 1.02
CCDC189A1A4V9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CCDC189A1A4V9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC189A1A4V9 AL158211.5-201ENST00000623583 2518 ntBASIC21.42■■□□□ 1.02
CCDC189A1A4V9 AL031602.1-201ENST00000633169 911 ntBASIC21.42■■□□□ 1.02
CCDC189A1A4V9 AC068587.7-201ENST00000641602 218 ntBASIC21.42■■□□□ 1.02
CCDC189A1A4V9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC189A1A4V9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CCDC189A1A4V9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC189A1A4V9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 GUSBP5-201ENST00000418136 578 ntBASIC21.41■■□□□ 1.02
CCDC189A1A4V9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC189A1A4V9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC189A1A4V9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC189A1A4V9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CCDC189A1A4V9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC189A1A4V9 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC189A1A4V9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC189A1A4V9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC189A1A4V9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC189A1A4V9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC189A1A4V9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms