Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 AC007952.6-201ENST00000573168 2673 ntBASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 AC003957.1-201ENST00000625108 2673 ntBASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 RAP2CP1-202ENST00000605179 643 ntBASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.21□□□□□ -0.14
TRAV13-2A0A0B4J235 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV13-2A0A0B4J235 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-2A0A0B4J235 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 AC007029.1-201ENST00000604183 313 ntBASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV13-2A0A0B4J235 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-2A0A0B4J235 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 LINC01006-201ENST00000333319 2292 ntBASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 LINC01960-201ENST00000563759 1884 ntBASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 RPS2P7-201ENST00000447334 885 ntBASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 CR559946.2-201ENST00000623684 991 ntBASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV13-2A0A0B4J235 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-2A0A0B4J235 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms