Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC187A0A096LP49 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 AC069152.1-201ENST00000438030 544 ntBASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 CNN2P6-201ENST00000439038 900 ntBASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 AC010536.3-201ENST00000620306 533 ntBASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 AC133041.1-202ENST00000642053 222 ntBASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC187A0A096LP49 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 AC105036.2-201ENST00000569468 176 ntBASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 AC133552.2-202ENST00000575694 574 ntBASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC187A0A096LP49 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 DUSP8P5-201ENST00000422884 1815 ntBASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 AC066615.1-201ENST00000640911 628 ntBASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC187A0A096LP49 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 AC073210.2-201ENST00000430369 194 ntBASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC187A0A096LP49 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC187A0A096LP49 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC187A0A096LP49 FAM201B-201ENST00000458407 597 ntBASIC20.47■□□□□ 0.87
CCDC187A0A096LP49 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC187A0A096LP49 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC187A0A096LP49 AP004607.7-201ENST00000527152 1677 ntBASIC20.47■□□□□ 0.87
CCDC187A0A096LP49 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC187A0A096LP49 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC187A0A096LP49 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC187A0A096LP49 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC187A0A096LP49 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC187A0A096LP49 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 AL034346.1-201ENST00000568244 1277 ntBASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 MIR4651-201ENST00000582622 73 ntBASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 AC013268.1-206ENST00000638368 961 ntBASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 AC112229.1-201ENST00000639295 961 ntBASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 LINC01960-201ENST00000563759 1884 ntBASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC187A0A096LP49 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC187A0A096LP49 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC187A0A096LP49 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms