Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV30A0A087WSZ9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TRAV30A0A087WSZ9 AC092667.1-201ENST00000434301 2586 ntBASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 AC006455.2-201ENST00000429931 906 ntBASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 OR2I1P-207ENST00000453522 948 ntBASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 DUX4L19-201ENST00000557448 1267 ntBASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV30A0A087WSZ9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV30A0A087WSZ9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV30A0A087WSZ9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV30A0A087WSZ9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV30A0A087WSZ9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV30A0A087WSZ9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
TRAV30A0A087WSZ9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV30A0A087WSZ9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV30A0A087WSZ9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV30A0A087WSZ9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 OR7E47P-201ENST00000546390 1422 ntBASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms