Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV18A0A075B6X5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV18A0A075B6X5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 AC010980.1-201ENST00000587192 1142 ntBASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 LINC01521-201ENST00000504184 1943 ntBASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV18A0A075B6X5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRAV18A0A075B6X5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRAV18A0A075B6X5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV18A0A075B6X5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV18A0A075B6X5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV18A0A075B6X5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms