Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 RNF165-205ENST00000588679 2904 ntBASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 LINC01960-201ENST00000563759 1884 ntBASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGKV2-28A0A075B6P5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
IGKV2-28A0A075B6P5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 KRT8P33-201ENST00000508125 1423 ntBASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 AC004448.1-201ENST00000458332 883 ntBASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
IGKV2-28A0A075B6P5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 AC012354.3-201ENST00000623734 483 ntBASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 LINC01006-201ENST00000333319 2292 ntBASIC14.16□□□□□ -0.14
IGKV2-28A0A075B6P5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms