Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 DRD1-201ENST00000393752 4054 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 NF2-207ENST00000397789 1857 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 AC020629.1-201ENST00000550858 1650 ntBASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 HOXA-AS3-202ENST00000518947 3992 ntTSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 NOL10-201ENST00000345985 3333 ntTSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AC008555.2-201ENST00000600348 1714 ntTSL 5 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 C17orf64-201ENST00000269127 950 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 HNRNPA1P6-201ENST00000394002 1117 ntBASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 RPSAP19-201ENST00000431241 880 ntBASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AL390061.1-201ENST00000457804 293 ntTSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 RN7SL340P-201ENST00000470792 296 ntBASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 SNORA74.2-201ENST00000516496 180 ntBASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 RPL30-213ENST00000523172 274 ntTSL 5 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AC009654.1-201ENST00000560503 757 ntTSL 3 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 ACTG1P16-201ENST00000564713 1082 ntBASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 GSG1L-205ENST00000569166 585 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AC124319.1-201ENST00000576808 653 ntTSL 5 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AC008750.6-201ENST00000598746 322 ntBASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AC078880.3-201ENST00000603439 1121 ntBASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 PDLIM1P1-201ENST00000604187 969 ntBASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 BPIFA1-204ENST00000618484 907 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 PRSS2-204ENST00000632805 807 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 SCN5A-209ENST00000451551 8343 ntTSL 5 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 LAMP5-201ENST00000246070 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 ITGA11-201ENST00000315757 3955 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AC124944.3-201ENST00000607976 1304 ntBASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 GRM3-203ENST00000439827 1811 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 SEMA6D-207ENST00000536845 3754 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 HLA-DOB-206ENST00000438763 1372 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 TMEM159-203ENST00000451578 1378 ntTSL 2 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 AC114811.2-201ENST00000569927 5647 ntBASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 CACNA2D4-202ENST00000382722 5475 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NPIPA3F8WFD2 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 MCU-204ENST00000536019 3224 ntTSL 2 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 MYH16-203ENST00000439784 5836 ntBASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 TRIB1-202ENST00000519576 1409 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 ZNF670-201ENST00000366503 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 AL132642.2-201ENST00000623423 1998 ntBASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 AC008663.2-201ENST00000517299 1777 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 CIITA-202ENST00000381835 2344 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 PPATP1-201ENST00000496669 1547 ntBASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 HERC2P10-201ENST00000570209 2393 ntBASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 ADAMTSL3-205ENST00000567476 6873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 THUMPD1P1-201ENST00000400014 1041 ntBASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 AP001610.1-201ENST00000411427 1116 ntTSL 5 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 PPIEL-201ENST00000427240 813 ntBASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 MAPT-208ENST00000431008 1233 ntTSL 5 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 AC023347.1-201ENST00000435352 604 ntTSL 4 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 AL356273.1-201ENST00000441261 1152 ntBASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 AL132709.1-202ENST00000448840 588 ntTSL 3 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 RN7SL756P-201ENST00000488739 268 ntBASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC11.01□□□□□ -0.65
NPIPA3F8WFD2 DNM1P17-201ENST00000512082 426 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms