Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HCFC2Q9Y5Z7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HCFC2Q9Y5Z7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.81■■□□□ 1.24
HCFC2Q9Y5Z7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HCFC2Q9Y5Z7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HCFC2Q9Y5Z7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
HCFC2Q9Y5Z7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
HCFC2Q9Y5Z7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
HCFC2Q9Y5Z7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HCFC2Q9Y5Z7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
HCFC2Q9Y5Z7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HCFC2Q9Y5Z7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
HCFC2Q9Y5Z7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
HCFC2Q9Y5Z7 DUSP8P5-201ENST00000422884 1815 ntBASIC22.8■■□□□ 1.24
HCFC2Q9Y5Z7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 AF201337.1-201ENST00000520239 748 ntBASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
HCFC2Q9Y5Z7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
HCFC2Q9Y5Z7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.78■■□□□ 1.24
HCFC2Q9Y5Z7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.78■■□□□ 1.24
HCFC2Q9Y5Z7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.78■■□□□ 1.24
HCFC2Q9Y5Z7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HCFC2Q9Y5Z7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
HCFC2Q9Y5Z7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HCFC2Q9Y5Z7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
HCFC2Q9Y5Z7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HCFC2Q9Y5Z7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 AC133041.1-202ENST00000642053 222 ntBASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.77■■□□□ 1.24
HCFC2Q9Y5Z7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
HCFC2Q9Y5Z7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
HCFC2Q9Y5Z7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HCFC2Q9Y5Z7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
HCFC2Q9Y5Z7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.76■■□□□ 1.23
HCFC2Q9Y5Z7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.76■■□□□ 1.23
HCFC2Q9Y5Z7 AC105036.2-201ENST00000569468 176 ntBASIC22.76■■□□□ 1.23
HCFC2Q9Y5Z7 AC133552.2-202ENST00000575694 574 ntBASIC22.76■■□□□ 1.23
HCFC2Q9Y5Z7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
HCFC2Q9Y5Z7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 AC073210.2-201ENST00000430369 194 ntBASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 AC010141.2-201ENST00000452426 721 ntBASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 AC098934.4-201ENST00000564127 592 ntBASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 AC010536.3-201ENST00000620306 533 ntBASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HCFC2Q9Y5Z7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 FAM201B-201ENST00000458407 597 ntBASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 AC138907.5-202ENST00000569484 235 ntBASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HCFC2Q9Y5Z7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.73■■□□□ 1.23
HCFC2Q9Y5Z7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms