Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCN10AQ9Y5Y9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.98■■□□□ 1.43
SCN10AQ9Y5Y9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SCN10AQ9Y5Y9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.97■■□□□ 1.43
SCN10AQ9Y5Y9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCN10AQ9Y5Y9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.97■■□□□ 1.43
SCN10AQ9Y5Y9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SCN10AQ9Y5Y9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SCN10AQ9Y5Y9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.97■■□□□ 1.43
SCN10AQ9Y5Y9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCN10AQ9Y5Y9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCN10AQ9Y5Y9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 AC007322.1-201ENST00000426983 750 ntBASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 KRT18P20-201ENST00000548986 1279 ntBASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 AC098934.4-201ENST00000564127 592 ntBASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SCN10AQ9Y5Y9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCN10AQ9Y5Y9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.95■■□□□ 1.42
SCN10AQ9Y5Y9 AP001160.3-201ENST00000601484 763 ntBASIC23.95■■□□□ 1.42
SCN10AQ9Y5Y9 AC005181.1-201ENST00000604782 1256 ntBASIC23.95■■□□□ 1.42
SCN10AQ9Y5Y9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCN10AQ9Y5Y9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCN10AQ9Y5Y9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCN10AQ9Y5Y9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 AF201337.1-201ENST00000520239 748 ntBASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 AC079089.2-201ENST00000531211 1277 ntBASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 AL138781.1-201ENST00000566567 1274 ntBASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 KRT18P6-201ENST00000555540 1265 ntBASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCN10AQ9Y5Y9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 AC083906.2-201ENST00000511578 360 ntBASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCN10AQ9Y5Y9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 CD99P1-205ENST00000527459 561 ntBASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 AP004607.7-201ENST00000527152 1677 ntBASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 SLC29A4P1-201ENST00000398760 971 ntBASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 AL034346.1-201ENST00000568244 1277 ntBASIC23.92■■□□□ 1.42
SCN10AQ9Y5Y9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 AC069152.1-201ENST00000438030 544 ntBASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 MIR4651-201ENST00000582622 73 ntBASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
SCN10AQ9Y5Y9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 AC010536.3-201ENST00000620306 533 ntBASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCN10AQ9Y5Y9 AC073210.2-201ENST00000430369 194 ntBASIC23.89■■□□□ 1.42
SCN10AQ9Y5Y9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
SCN10AQ9Y5Y9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SCN10AQ9Y5Y9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms