Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 OR7E47P-201ENST00000546390 1422 ntBASIC21.86■■□□□ 1.09
RAI2Q9Y5P3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAI2Q9Y5P3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAI2Q9Y5P3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.86■■□□□ 1.09
RAI2Q9Y5P3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RAI2Q9Y5P3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 AC242852.2-201ENST00000615738 1807 ntBASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 AC022517.1-201ENST00000592429 346 ntBASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.85■■□□□ 1.09
RAI2Q9Y5P3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAI2Q9Y5P3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAI2Q9Y5P3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RAI2Q9Y5P3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.84■■□□□ 1.09
RAI2Q9Y5P3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.84■■□□□ 1.09
RAI2Q9Y5P3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.84■■□□□ 1.09
RAI2Q9Y5P3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.84■■□□□ 1.09
RAI2Q9Y5P3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAI2Q9Y5P3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.84■■□□□ 1.09
RAI2Q9Y5P3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.84■■□□□ 1.09
RAI2Q9Y5P3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.83■■□□□ 1.09
RAI2Q9Y5P3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAI2Q9Y5P3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAI2Q9Y5P3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
RAI2Q9Y5P3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAI2Q9Y5P3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.83■■□□□ 1.08
RAI2Q9Y5P3 AL117328.2-201ENST00000624617 1940 ntBASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 AC012414.1-201ENST00000556676 535 ntBASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.82■■□□□ 1.08
RAI2Q9Y5P3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 AL137784.2-201ENST00000607332 1000 ntBASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 AL358852.1-201ENST00000623174 1268 ntBASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI2Q9Y5P3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 AL354811.1-201ENST00000610286 706 ntBASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 ECEL1P1-201ENST00000373592 1742 ntBASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAI2Q9Y5P3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAI2Q9Y5P3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms