Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.62■■□□□ 1.21
PCDHA3Q9Y5H8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA3Q9Y5H8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHA3Q9Y5H8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA3Q9Y5H8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHA3Q9Y5H8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA3Q9Y5H8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA3Q9Y5H8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA3Q9Y5H8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA3Q9Y5H8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA3Q9Y5H8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHA3Q9Y5H8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA3Q9Y5H8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA3Q9Y5H8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA3Q9Y5H8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA3Q9Y5H8 AC068587.7-201ENST00000641602 218 ntBASIC22.59■■□□□ 1.21
PCDHA3Q9Y5H8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHA3Q9Y5H8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA3Q9Y5H8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 OR2I1P-207ENST00000453522 948 ntBASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA3Q9Y5H8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHA3Q9Y5H8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
PCDHA3Q9Y5H8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 OR7E47P-201ENST00000546390 1422 ntBASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 AC026471.6-201ENST00000622954 1905 ntBASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA3Q9Y5H8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA3Q9Y5H8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PCDHA3Q9Y5H8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA3Q9Y5H8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHA3Q9Y5H8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHA3Q9Y5H8 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.56■■□□□ 1.2
PCDHA3Q9Y5H8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PCDHA3Q9Y5H8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA3Q9Y5H8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PCDHA3Q9Y5H8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHA3Q9Y5H8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 AL512631.2-201ENST00000604634 923 ntBASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 Z98882.1-201ENST00000622160 2253 ntBASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA3Q9Y5H8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHA3Q9Y5H8 SRD5A1P1-201ENST00000442297 786 ntBASIC22.54■■□□□ 1.2
PCDHA3Q9Y5H8 AC005229.4-201ENST00000610085 2198 ntBASIC22.54■■□□□ 1.2
PCDHA3Q9Y5H8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA3Q9Y5H8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHA3Q9Y5H8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA3Q9Y5H8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA3Q9Y5H8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA3Q9Y5H8 AC092171.4-201ENST00000609130 632 ntBASIC22.53■■□□□ 1.2
PCDHA3Q9Y5H8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHA3Q9Y5H8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PCDHA3Q9Y5H8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA3Q9Y5H8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA3Q9Y5H8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms