Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF6Q9Y4K3 AL031602.1-201ENST00000633169 911 ntBASIC21.02■□□□□ 0.96
TRAF6Q9Y4K3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAF6Q9Y4K3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAF6Q9Y4K3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF6Q9Y4K3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF6Q9Y4K3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRAF6Q9Y4K3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
TRAF6Q9Y4K3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF6Q9Y4K3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21■□□□□ 0.95
TRAF6Q9Y4K3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21■□□□□ 0.95
TRAF6Q9Y4K3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF6Q9Y4K3 UNC93B8-201ENST00000511903 705 ntBASIC21■□□□□ 0.95
TRAF6Q9Y4K3 AC079089.2-201ENST00000531211 1277 ntBASIC21■□□□□ 0.95
TRAF6Q9Y4K3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF6Q9Y4K3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF6Q9Y4K3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRAF6Q9Y4K3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF6Q9Y4K3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF6Q9Y4K3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF6Q9Y4K3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF6Q9Y4K3 AL451085.2-201ENST00000605085 799 ntBASIC20.99■□□□□ 0.95
TRAF6Q9Y4K3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF6Q9Y4K3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF6Q9Y4K3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAF6Q9Y4K3 Z98882.1-201ENST00000622160 2253 ntBASIC20.99■□□□□ 0.95
TRAF6Q9Y4K3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF6Q9Y4K3 AC133637.1-201ENST00000624115 1537 ntBASIC20.99■□□□□ 0.95
TRAF6Q9Y4K3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF6Q9Y4K3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 SLC25A24-204ENST00000569674 2357 ntBASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF6Q9Y4K3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 pRNA.6-201ENST00000610482 90 ntBASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 pRNA.5-201ENST00000612139 90 ntBASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 pRNA.11-201ENST00000618423 90 ntBASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 pRNA.13-201ENST00000619112 90 ntBASIC20.96■□□□□ 0.95
TRAF6Q9Y4K3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRAF6Q9Y4K3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF6Q9Y4K3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.95■□□□□ 0.94
TRAF6Q9Y4K3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAF6Q9Y4K3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAF6Q9Y4K3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF6Q9Y4K3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF6Q9Y4K3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAF6Q9Y4K3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF6Q9Y4K3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms