Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.22■□□□□ 0.67
LSM2Q9Y333 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.22■□□□□ 0.67
LSM2Q9Y333 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM2Q9Y333 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.22■□□□□ 0.67
LSM2Q9Y333 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LSM2Q9Y333 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LSM2Q9Y333 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LSM2Q9Y333 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LSM2Q9Y333 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LSM2Q9Y333 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.21■□□□□ 0.67
LSM2Q9Y333 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.21■□□□□ 0.67
LSM2Q9Y333 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.21■□□□□ 0.67
LSM2Q9Y333 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LSM2Q9Y333 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LSM2Q9Y333 FEM1AP1-201ENST00000431297 1995 ntBASIC19.21■□□□□ 0.67
LSM2Q9Y333 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LSM2Q9Y333 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
LSM2Q9Y333 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSM2Q9Y333 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSM2Q9Y333 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSM2Q9Y333 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
LSM2Q9Y333 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSM2Q9Y333 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSM2Q9Y333 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.2■□□□□ 0.66
LSM2Q9Y333 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.2■□□□□ 0.66
LSM2Q9Y333 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LSM2Q9Y333 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.2■□□□□ 0.66
LSM2Q9Y333 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
LSM2Q9Y333 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
LSM2Q9Y333 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LSM2Q9Y333 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LSM2Q9Y333 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LSM2Q9Y333 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LSM2Q9Y333 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
LSM2Q9Y333 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LSM2Q9Y333 PVT1_1.1-201ENST00000615125 194 ntBASIC19.19■□□□□ 0.66
LSM2Q9Y333 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LSM2Q9Y333 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.19■□□□□ 0.66
LSM2Q9Y333 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LSM2Q9Y333 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.18■□□□□ 0.66
LSM2Q9Y333 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.18■□□□□ 0.66
LSM2Q9Y333 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LSM2Q9Y333 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.18■□□□□ 0.66
LSM2Q9Y333 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LSM2Q9Y333 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LSM2Q9Y333 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSM2Q9Y333 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
LSM2Q9Y333 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
LSM2Q9Y333 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM2Q9Y333 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LSM2Q9Y333 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LSM2Q9Y333 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
LSM2Q9Y333 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM2Q9Y333 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LSM2Q9Y333 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.17■□□□□ 0.66
LSM2Q9Y333 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LSM2Q9Y333 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM2Q9Y333 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.17■□□□□ 0.66
LSM2Q9Y333 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM2Q9Y333 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LSM2Q9Y333 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
LSM2Q9Y333 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 DUX4L18-201ENST00000553347 1267 ntBASIC19.16■□□□□ 0.66
LSM2Q9Y333 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.16■□□□□ 0.66
LSM2Q9Y333 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM2Q9Y333 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSM2Q9Y333 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM2Q9Y333 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.15■□□□□ 0.66
LSM2Q9Y333 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM2Q9Y333 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.15■□□□□ 0.66
LSM2Q9Y333 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM2Q9Y333 AC005703.6-201ENST00000623265 1329 ntBASIC19.15■□□□□ 0.66
LSM2Q9Y333 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms