Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC29.72■■■□□ 2.35
NINLQ9Y2I6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC29.72■■■□□ 2.35
NINLQ9Y2I6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC29.72■■■□□ 2.35
NINLQ9Y2I6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC29.72■■■□□ 2.35
NINLQ9Y2I6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
NINLQ9Y2I6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
NINLQ9Y2I6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
NINLQ9Y2I6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
NINLQ9Y2I6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
NINLQ9Y2I6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC29.71■■■□□ 2.35
NINLQ9Y2I6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
NINLQ9Y2I6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC29.71■■■□□ 2.35
NINLQ9Y2I6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC29.71■■■□□ 2.35
NINLQ9Y2I6 DUSP8P5-201ENST00000422884 1815 ntBASIC29.7■■■□□ 2.35
NINLQ9Y2I6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
NINLQ9Y2I6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
NINLQ9Y2I6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC29.7■■■□□ 2.35
NINLQ9Y2I6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC29.7■■■□□ 2.35
NINLQ9Y2I6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC29.7■■■□□ 2.35
NINLQ9Y2I6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
NINLQ9Y2I6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC29.7■■■□□ 2.34
NINLQ9Y2I6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
NINLQ9Y2I6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC29.7■■■□□ 2.34
NINLQ9Y2I6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC29.69■■■□□ 2.34
NINLQ9Y2I6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NINLQ9Y2I6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
NINLQ9Y2I6 AC016769.1-201ENST00000409132 1010 ntBASIC29.69■■■□□ 2.34
NINLQ9Y2I6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
NINLQ9Y2I6 TESC-206ENST00000541210 936 ntTSL 3 BASIC29.69■■■□□ 2.34
NINLQ9Y2I6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
NINLQ9Y2I6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
NINLQ9Y2I6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
NINLQ9Y2I6 AC137767.1-201ENST00000602918 1920 ntBASIC29.69■■■□□ 2.34
NINLQ9Y2I6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NINLQ9Y2I6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 AP004607.7-201ENST00000527152 1677 ntBASIC29.68■■■□□ 2.34
NINLQ9Y2I6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
NINLQ9Y2I6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NINLQ9Y2I6 KRT18P11-201ENST00000435214 1283 ntBASIC29.67■■■□□ 2.34
NINLQ9Y2I6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC29.67■■■□□ 2.34
NINLQ9Y2I6 RAP2CP1-201ENST00000605103 478 ntBASIC29.67■■■□□ 2.34
NINLQ9Y2I6 AC066615.1-201ENST00000640911 628 ntBASIC29.67■■■□□ 2.34
NINLQ9Y2I6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NINLQ9Y2I6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NINLQ9Y2I6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NINLQ9Y2I6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
NINLQ9Y2I6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NINLQ9Y2I6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
NINLQ9Y2I6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC29.66■■■□□ 2.34
NINLQ9Y2I6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC29.66■■■□□ 2.34
NINLQ9Y2I6 TMEM191A-211ENST00000637163 1067 ntBASIC29.66■■■□□ 2.34
NINLQ9Y2I6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NINLQ9Y2I6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NINLQ9Y2I6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 AP006587.3-201ENST00000525742 1516 ntBASIC29.65■■■□□ 2.34
NINLQ9Y2I6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NINLQ9Y2I6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NINLQ9Y2I6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
NINLQ9Y2I6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC29.64■■■□□ 2.34
NINLQ9Y2I6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC29.64■■■□□ 2.34
NINLQ9Y2I6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
NINLQ9Y2I6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NINLQ9Y2I6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NINLQ9Y2I6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NINLQ9Y2I6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
NINLQ9Y2I6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC29.64■■■□□ 2.34
NINLQ9Y2I6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
NINLQ9Y2I6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
NINLQ9Y2I6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.33
NINLQ9Y2I6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
NINLQ9Y2I6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC29.64■■■□□ 2.33
NINLQ9Y2I6 FXN-202ENST00000396364 980 ntTSL 5 BASIC29.64■■■□□ 2.33
NINLQ9Y2I6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC29.64■■■□□ 2.33
NINLQ9Y2I6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
NINLQ9Y2I6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC29.64■■■□□ 2.33
NINLQ9Y2I6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
NINLQ9Y2I6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
NINLQ9Y2I6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms