Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC33.69■■■□□ 2.98
CDK11AQ9UQ88 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC33.69■■■□□ 2.98
CDK11AQ9UQ88 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC33.69■■■□□ 2.98
CDK11AQ9UQ88 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC33.68■■■□□ 2.98
CDK11AQ9UQ88 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC33.68■■■□□ 2.98
CDK11AQ9UQ88 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
CDK11AQ9UQ88 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC33.68■■■□□ 2.98
CDK11AQ9UQ88 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC33.68■■■□□ 2.98
CDK11AQ9UQ88 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
CDK11AQ9UQ88 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
CDK11AQ9UQ88 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC33.68■■■□□ 2.98
CDK11AQ9UQ88 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC33.67■■■□□ 2.98
CDK11AQ9UQ88 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC33.67■■■□□ 2.98
CDK11AQ9UQ88 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
CDK11AQ9UQ88 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC33.67■■■□□ 2.98
CDK11AQ9UQ88 KRT18P20-201ENST00000548986 1279 ntBASIC33.67■■■□□ 2.98
CDK11AQ9UQ88 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC33.67■■■□□ 2.98
CDK11AQ9UQ88 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
CDK11AQ9UQ88 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
CDK11AQ9UQ88 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC33.67■■■□□ 2.98
CDK11AQ9UQ88 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
CDK11AQ9UQ88 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CDK11AQ9UQ88 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CDK11AQ9UQ88 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CDK11AQ9UQ88 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CDK11AQ9UQ88 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC33.66■■■□□ 2.98
CDK11AQ9UQ88 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
CDK11AQ9UQ88 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC33.66■■■□□ 2.98
CDK11AQ9UQ88 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC33.66■■■□□ 2.98
CDK11AQ9UQ88 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC33.66■■■□□ 2.98
CDK11AQ9UQ88 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 AC010141.2-201ENST00000452426 721 ntBASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 KRT18P6-201ENST00000555540 1265 ntBASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 AC138907.5-202ENST00000569484 235 ntBASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 DUSP8P5-201ENST00000422884 1815 ntBASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 AC092068.2-201ENST00000590491 1708 ntBASIC33.65■■■□□ 2.98
CDK11AQ9UQ88 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CDK11AQ9UQ88 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC33.64■■■□□ 2.98
CDK11AQ9UQ88 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.64■■■□□ 2.98
CDK11AQ9UQ88 SLC29A4P1-201ENST00000398760 971 ntBASIC33.64■■■□□ 2.98
CDK11AQ9UQ88 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC33.64■■■□□ 2.98
CDK11AQ9UQ88 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CDK11AQ9UQ88 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CDK11AQ9UQ88 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC33.64■■■□□ 2.98
CDK11AQ9UQ88 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
CDK11AQ9UQ88 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC33.63■■■□□ 2.97
CDK11AQ9UQ88 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
CDK11AQ9UQ88 FXN-202ENST00000396364 980 ntTSL 5 BASIC33.63■■■□□ 2.97
CDK11AQ9UQ88 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC33.63■■■□□ 2.97
CDK11AQ9UQ88 CNN2P6-201ENST00000439038 900 ntBASIC33.63■■■□□ 2.97
CDK11AQ9UQ88 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC33.63■■■□□ 2.97
CDK11AQ9UQ88 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC33.63■■■□□ 2.97
CDK11AQ9UQ88 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC33.63■■■□□ 2.97
CDK11AQ9UQ88 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC33.63■■■□□ 2.97
CDK11AQ9UQ88 PFKL-212ENST00000628044 129 ntTSL 3 BASIC33.62■■■□□ 2.97
CDK11AQ9UQ88 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
CDK11AQ9UQ88 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
CDK11AQ9UQ88 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
CDK11AQ9UQ88 ANOS2P-203ENST00000472227 1816 ntBASIC33.61■■■□□ 2.97
CDK11AQ9UQ88 AL138781.1-201ENST00000566567 1274 ntBASIC33.61■■■□□ 2.97
CDK11AQ9UQ88 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC33.61■■■□□ 2.97
CDK11AQ9UQ88 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
CDK11AQ9UQ88 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC33.61■■■□□ 2.97
CDK11AQ9UQ88 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC33.6■■■□□ 2.97
CDK11AQ9UQ88 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
CDK11AQ9UQ88 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
CDK11AQ9UQ88 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
CDK11AQ9UQ88 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC33.6■■■□□ 2.97
CDK11AQ9UQ88 RGMA-211ENST00000557420 989 ntTSL 3 BASIC33.6■■■□□ 2.97
CDK11AQ9UQ88 AC133552.2-202ENST00000575694 574 ntBASIC33.6■■■□□ 2.97
CDK11AQ9UQ88 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
CDK11AQ9UQ88 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
CDK11AQ9UQ88 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC33.59■■■□□ 2.97
CDK11AQ9UQ88 LINC01960-201ENST00000563759 1884 ntBASIC33.59■■■□□ 2.97
CDK11AQ9UQ88 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
CDK11AQ9UQ88 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC33.59■■■□□ 2.97
CDK11AQ9UQ88 AC010536.3-201ENST00000620306 533 ntBASIC33.59■■■□□ 2.97
CDK11AQ9UQ88 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
CDK11AQ9UQ88 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
CDK11AQ9UQ88 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 AC073210.2-201ENST00000430369 194 ntBASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 TSPY20P-201ENST00000450910 630 ntBASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 AF201337.1-201ENST00000520239 748 ntBASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 KLF13-207ENST00000560473 489 ntTSL 3 BASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC33.58■■■□□ 2.97
CDK11AQ9UQ88 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC33.57■■■□□ 2.96
CDK11AQ9UQ88 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC33.57■■■□□ 2.96
CDK11AQ9UQ88 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC33.57■■■□□ 2.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms